Gene Information

Name : ETEC_p948_0570 (ETEC_p948_0570)
Accession : YP_006203870.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : IS629 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 51885 - 52775 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAAC
GTATTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATAACTGGCTGAAGAAAG
AGATACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATC
AGAGTGGTCAGATGCACTGTGGCACGTCTCATGGCGATTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTAC
GACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGG
TGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATT
GTGGGGTGGCGGGTCTCACCGTCCATGGAGACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC
GTCCGGCACAGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGAT
TACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAG
GTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCG
ACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATC
TGGCAGCCTGA

Protein sequence :
MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDNWLKKEIQRVYDENHKVYGVRKVWRQLLREGI
RVVRCTVARLMAIMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYI
VGWRVSPSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAE
VIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 6e-136 99
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-134 98
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-108 98
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-101 98
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-135 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-131 97
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 9e-93 97
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-131 97
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-93 97
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-131 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-134 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-134 97
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 9e-131 96
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-130 95
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-128 95
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-130 95
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 9e-133 95
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 6e-133 95
Z1638 NP_287141.1 transposase Not tested TAI Protein 5e-130 94
Z1198 NP_286733.1 transposase Not tested TAI Protein 5e-130 94
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-129 93
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 4e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_0570 YP_006203870.1 IS629 transposase VFG1602 Protein 2e-129 93