Gene Information

Name : ETEC_p948_0530 (ETEC_p948_0530)
Accession : YP_006203867.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 49482 - 50294 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence :
ATGCGATTAGCTTCCCGTTTTGGTCGATATAATTCTATTCGCCGTGAGCGCCCGTTAACGGATGACGAATTAATGCAGTT
TGTTCCATCTGTCTTTTCTGGTGATAAACATGAATCCCGGAGTGAGCGTTATACATATATCCCAACCATCAATATCATCA
ATAAGTTACGTGATGAAGGTTTCCAGCCGTTCTTTGCCTGTCAGAGTCGGGTTCGTGATTTGGGACGCCGCGAATACAGT
AAACATATGTTACGTCTTCGCAGGGAAGGGCATATTAACGGGAAAGAAGTTCCTGAAATTATCCTGCTTAATTCACATGA
TGGTTCATCCAGTTATCAGATGATCCCAGGAATTTTTCGTTTTGTCTGCACAAATGGCCTGGTGTGTGGGAATAATTTTG
GCGAAATCCGCATTCCACATAAAGGTGATATTGTCGGGCAGGTTATTGAGGGAGCGTATGAAGTGCTCGGTGTCTTTGAT
AAAGTCACTGAAAATATGGAGATAATGAAAGAGATACATCTTAACAGTGACGAACAACATTTATTTGGCAGAGCTGCATT
GATGGCCAGGTACGAAGATGAAAATAAAACGCCAGTGACGCCAGAACAAATAATTACTCTCCGCCGTTGGGAGGATAAAC
AGAACGATCTCTGGACAACCTGGCAGCGGGTTCAGGAGAATATGATAAAAGGTGGATTATCGGGGCGAAGTGCCTCCGGT
AAAAATACCAGAACAAGAGCCATTACAGGCATTGACGGTGATATCCGAATCAACAAAGCATTATGGATGATTGCTGAACA
GTTCAGGGAGTAG

Protein sequence :
MRLASRFGRYNSIRRERPLTDDELMQFVPSVFSGDKHESRSERYTYIPTINIINKLRDEGFQPFFACQSRVRDLGRREYS
KHMLRLRREGHINGKEVPEIILLNSHDGSSSYQMIPGIFRFVCTNGLVCGNNFGEIRIPHKGDIVGQVIEGAYEVLGVFD
KVTENMEIMKEIHLNSDEQHLFGRAALMARYEDENKTPVTPEQIITLRRWEDKQNDLWTTWQRVQENMIKGGLSGRSASG
KNTRTRAITGIDGDIRINKALWMIAEQFRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-81 63
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-81 63
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-81 63
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-81 62
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-81 62
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-81 62
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 8e-82 62
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 6e-84 62
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-79 62
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-79 62
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-79 62
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 3e-80 62
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 7e-80 61
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 9e-80 61
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 7e-80 61
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-82 55
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 9e-78 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_0530 YP_006203867.1 hypothetical protein VFG1615 Protein 2e-80 62
ETEC_p948_0530 YP_006203867.1 hypothetical protein VFG1526 Protein 2e-81 62
ETEC_p948_0530 YP_006203867.1 hypothetical protein VFG1676 Protein 5e-80 61
ETEC_p948_0530 YP_006203867.1 hypothetical protein VFG0658 Protein 3e-80 61