Gene Information

Name : ETEC_p948_0460 (ETEC_p948_0460)
Accession : YP_006203860.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : ISSfl4 transposase (pseudogene)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 45361 - 45807 bp
Length : 447 bp
Strand : -
Note : -

DNA sequence : 
TTGACAGAGTTATACGCCATAGAAGCGGAGATACGCGGCAGTCCGGCAGAGGAACGGCTCGCAGTCAGAAAAGCCAGAAG
CGTCCAGTTGATGCAGTCGTTGTACGACTGGATAGAGTTGCAGAGGAAAACGCTGTCGAAACATGCGGAGATGGCGAAGG
CGTTCGACTATATCCTGAATCACTGGAATGCGCTGAACGAGTTCTGTCGTGACGGCCAGGTGGAAATAGACAACAACATC
GGTGAAAACGCGTTACGCTCGGTGGCGGTTGGAAGAAAAAATTATCTCTTCTTCGGCTCAGACAAGGGAGGAGAAAGTGC
GGCGATCATCTACAGTCTGCTGGTCACCTGCAAGCTGAACGAAGTGGAGCCGGAGGACTGGTTGCGCGAAGTGATCGTGA
AGCTCAATGACTGGCCGTCGAACCGTGTGCATGAACTGCTGCCCTAG

Protein sequence : 
MTELYAIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIELQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGQVEIDNNI
GENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKLNEVEPEDWLREVIVKLNDWPSNRVHELLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2970 NP_708744.1 hypothetical protein Not tested SHI-1 Protein 9e-29 65
unnamed AAK00461.1 unknown Not tested SHI-1 Protein 6e-29 65
l0015 CAD33721.1 putative IS protein Not tested PAI I 536 Protein 1e-39 61
Z1158 NP_286693.1 hypothetical protein Not tested TAI Protein 6e-21 43
Z1597 NP_287101.1 hypothetical protein Not tested TAI Protein 6e-21 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_0460 YP_006203860.1 ISSfl4 transposase (pseudogene) VFG0632 Protein 3e-29 65
ETEC_p948_0460 YP_006203860.1 ISSfl4 transposase (pseudogene) VFG1462 Protein 5e-40 61