Gene Information

Name : ETEC_p948_0170 (ETEC_p948_0170)
Accession : YP_006203834.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : IS629 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 21481 - 21807 bp
Length : 327 bp
Strand : -
Note : -

DNA sequence :
ATGACTAAAAATACTCGTTTTTCCCCCGAAGTCCGTCAGAGGGCGATTCGTATGGTTCTGGAAAGTCAGGGCGAATATGA
CTCACAGTGGGCGGCAATTTGTTCCATTGCCCCAAAGATTGACTGTACACCGGAGACTCTGCGTGTCTGGGTACGCCAGC
ATGAGCGGGATACCGGAGGCGGTGATGGCGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAACGTGAAAAT
CGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTCGACCGCCTCTGGAA
AAAGTGA

Protein sequence :
MTKNTRFSPEVRQRAIRMVLESQGEYDSQWAAICSIAPKIDCTPETLRVWVRQHERDTGGGDGGLTTAERQRLKELEREN
RELRRSNDILRQASAYFAKAEFDRLWKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 1e-29 98
unnamed AAF09023.1 unknown Not tested SHI-O Protein 9e-29 98
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 1e-29 98
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 9e-29 98
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 1e-29 98
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 1e-28 98
IS629 CAC37925.1 hypothetical protein Not tested LEE Protein 2e-29 98
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 1e-28 98
IS629 CAI43820.1 hypothetical protein Not tested LEE Protein 2e-29 98
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 1e-28 98
IS629 CAI43841.1 hypothetical protein Not tested LEE Protein 2e-29 98
IS629 CAI43908.1 hypothetical protein 1 Not tested LEE Protein 2e-29 98
ECO103_3584 YP_003223442.1 IS629 transposase OrfA Not tested LEE Protein 3e-29 98
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 1e-29 98
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-28 97
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 3e-28 97
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 3e-28 97
SF3706 NP_709445.1 IS629 ORF1 Not tested SHI-2 Protein 9e-29 97
S4062 NP_839231.1 IS629 orfA Not tested SHI-2 Protein 4e-28 97
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-28 97
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 2e-28 97
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-28 97
c3596 NP_755471.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-27 95
c5177 NP_757025.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-27 95
unnamed CAD42084.1 hypothetical protein Not tested PAI II 536 Protein 4e-27 95
ECUMN_3344 YP_002414020.1 transposase ORF A, IS629 Not tested Not named Protein 3e-27 95
r13 AAC61722.1 R13 Not tested PAI I CFT073 Protein 2e-27 95
unnamed AAL67404.1 R13-like protein Not tested PAI II CFT073 Protein 2e-27 95
APECO1_3498 YP_854313.1 transposase; OrfA protein of insertion sequence IS629 Not tested PAI I APEC-O1 Protein 3e-26 93
ORF_36 AAZ04445.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-26 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_0170 YP_006203834.1 IS629 transposase VFG0643 Protein 9e-29 97
ETEC_p948_0170 YP_006203834.1 IS629 transposase VFG0606 Protein 3e-29 97
ETEC_p948_0170 YP_006203834.1 IS629 transposase VFG1603 Protein 1e-27 95
ETEC_p948_0170 YP_006203834.1 IS629 transposase VFG1717 Protein 1e-27 95