Gene Information

Name : ETEC_p948_1100 (ETEC_p948_1100)
Accession : YP_006203909.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : IS911 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 90717 - 91556 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence :
GTGGTCACACTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAGATACTGGAAAAACCGTCCTGAAAAACCAGAGGG
CAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATGGCATCAGCCACGGTTCGGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCGGAGAGGCTACCAGATGGGATGCTGGCTTGCTGGCAGGCTCATGAAAGAGCTGGGGCTGGTCAGCTGT
CAGCAGCCGACTCACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAAAGGCAGTTCGCCGT
GACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTC
TCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGGAA
ATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAGTT
CCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGAAC
GCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAACG
GACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTACCCCCAAACGAATCGGAAAATCG
ATACTGGAAAAACTCTAACTCGGTGGCCAGTTTTTGTTGA

Protein sequence :
MVTLCHVFGVHRSSYRYWKNRPEKPEGRRAVLRSQVLELHGISHGSAGARSIATMATRRGYQMGCWLAGRLMKELGLVSC
QQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-97 89
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-97 89
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-93 67
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-93 67
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-93 67
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-93 67
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-93 67
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 3e-93 67
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 4e-93 67
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 3e-93 67
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-64 64
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-64 64
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-64 62
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-64 62
Z5089 NP_290241.1 transposase Not tested LEE Protein 4e-65 62
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 3e-65 62
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-67 62
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 3e-61 54
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_1100 YP_006203909.1 IS911 transposase VFG1484 Protein 2e-97 89
ETEC_p948_1100 YP_006203909.1 IS911 transposase VFG1122 Protein 2e-93 67
ETEC_p948_1100 YP_006203909.1 IS911 transposase VFG0785 Protein 2e-65 62