Gene Information

Name : ETEC_p948_0930 (ETEC_p948_0930)
Accession : YP_006203900.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 80289 - 80792 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGCCGGGCAACTGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTTTCAAAATCGGTGGCGCAGCATGACAAAGTCATCGGGCATTAT
CTGAACATAAAACACTATCAATAA

Protein sequence : 
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVAQHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 2e-74 97
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 2e-74 97
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 2e-74 97
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 8e-72 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 6e-73 93
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 3e-72 92
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 3e-72 92
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 8e-55 91
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 8e-58 91
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-71 90
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-71 90
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 9e-70 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_0930 YP_006203900.1 IS1 transposase VFG0612 Protein 3e-70 89