Gene Information

Name : tnpA (ETEC_p948_0860)
Accession : YP_006203893.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 71734 - 74742 bp
Length : 3009 bp
Strand : +
Note : -

DNA sequence :
TTGCCCGCCGATTTTTTAAATGCCGAACAACGGGCCAGCTATGGTCAGTTTTCCGGCGAACCTAATGATGTTCAACTGGC
CCGCTTCTTTCTGTTGGATGAAGCGGATATGGAGTTCATTAACAACCGGCGCGGCAGGGCAAACCGTTTTGCGGTGGCAT
TGATGATCGGGTGTGTTCGCTTTCTTGGTACATGGCTTCATGATCTGTCATCAATTCCGGCTAACGCACAGTGGTTTGTC
GCCCGACAACTGGGGATATCCGATACAAGTGTCCTAGCCGATTATTCCAGAAGAGAAACCACACTGCGTGAACATCAGGC
CCTAATCCGGCGGCAGTATGGTTATCGGGATTTTTCCTGGCCATGGACCTTCCGGCTAAGCCGGTTGCTGTTCACTCGCT
GCTGGCTCAGCAATGAGCGTCCGGGGCTACTTTTCGATCTGGCGACCAGATGGCTTCTGCAAAACAAAATACTGTTGCCA
GGCGTAACCACGCTGACCCGTCTGATATCACAAATTCGTGAAAAATCAGCAGACAGGCTCTGGAACAGACTGTCCGGACT
GGTATCAGATGCGCAGAATGCGCAACTGGAAGAACTGTTACTGGTTCCTGAAGGTGCACGAAACTCGCGTTTTGACCAGT
TAAGAAAAGGGCCGGTTGCCATCAGCGGCCCAGCATTTAACCAGGCAGTTGCGCGTTATCTGAAACTTAAAGCATACGGG
ATACAGTCGATTGATTTTACCGGTATACCTCCGGTTCGCTTCAACACTCTGGCGCAATATGCAGACATTACTTCAGTTTA
TAAAATTGCCAGAATGTCTCCAGCAAGACGAACAGCGATGCTGGTTGCATTTGTTCGTTCGTGTGAAATATCAGCCCTGG
ATAATGCACTGGACGTTCTTGATGGTGTCATTGCTGATATTGGGCGGGAAGCGAAAAAAATTGGGCAGAAAAAACGACTG
CGGACACTGAAGGACCTCGATAAATCTGCACTGGAGCTGGCAAATATCTGCCAGATGCTTCTGGATGAAAATATCGACAG
TGAATTAGTCCGCGCGACAATCTTTGAAAGATATCCTCCGTCCAGACTGGCCGATACAATCGGATTTATCAACGCGATTG
CGAGACCTCCTGACGCCAGTTTTCATGATGAAATGGTGGAGCAGTACGGAAGGGTACGCCGTTTTCTTCCCTGCCTGTTG
GAAAATATTGAATTCAGCGCAACACCGGCAGGTGAAACAACACTGGAAGCTATTCGTTACCTTGCAGCGATCCGCTCAAC
CCGGAGACAACATATTGATGATGCGCCAATGGCGATAGTAACAGGCCCCTGGAAACGACTCTGCTATGGCAAGGATGGTC
ATATTTCCCGACAGGGTTATACCCTTTGTGTTATGAATAAGTTACAGGACTGTTTGCGGCGACGGGATATTTATGTTCCG
CAGAGCGGTCGCTGGGGAGACCCCAGGGCCCTGCTTCTTCAGGGGCAGGACTGGCACGCCAGCAGAGTACAGGTTTATCG
TTCCCTTGTACACTCTCTCAATGCAAGTGAAGCTGTCAGTGCTCTGACCCAACAGCTTGATACTGCGTATCGGCAGGTTG
CTAAAAACTTTGCGGACAACCAGGCTGTTTCTCTGGACTTCAGCGGTAAACGCCCAAAGCTCACCATTGCTAACCTGAAC
GGGCTGGATGAATCACCCACGCTGAAGTCGCTCGCGGAACGCGTTTCTGGCCTGCTTCCTGTTGTCGACCTGACTGAGCT
TCTTCTTGAAATTAATGCCCATACAGGGTTTGCAGAGGAATTTACTCATGCAAGTGAGGAAGGTGCTCGAATGGAGGACC
TGACGGTCAGTATTTGCGCGGTATTGCTGGCCGAAGCCTGTAATATTGGAATGGAACCATTTATCCGACCGAATGTTCCG
GCGCTGACCCGTCATCGTCTGAGCTGGACCCGGCAGAATTATCTGCGGGCTGAAACGCTGGTAAAAGCTAACGCCAGGCT
GGTTGATTATCAGTCAACTCTTCTTCTGGCACAGAAATGGGGTGGCGGCGAAGTGGCCTCAGCGGATGGCATGAGGTTTA
TTGCACCGGTACGAACAGTACACGCAGGGCCGAACCGAAAATATTTTGGTTCCGGCCGCGGGCTCACCTGGTACAACTTT
ATTTCAGATCAGTATTCCGGATTTCATGGCATTGTCGTTCCTGGTACTTTGAGAGATTCTATATTTGTCCTGGAAGGACT
GCTGGAGCAGCAGACGGGGTTAAACCCGACAGAAATAATGACCGATACGGCAGGTTCCAGCGATCTGATCTTTGGCCTTT
TCTGGTTACTGGGCTATCAGTTTTCTCCGCGTCTGGCTGACGCAGGTGCTTCAGTATTCTGGCGCACGGATAAAGATGCG
GATTATGGTGTACTTAATGATCTTGCCCGTAACACCGCCAATACGCGGAAGATTGAGCAGCACTGGGATGATATGATGCG
TATGGCCGGTTCCCTGACGTTGGGAAAAATCCGCGCTTCAGTGGCGATCCGTTCATTATTGAGCAGTGAACGACCTTCTG
GCCTGACGCAGGCGATTATCGAAGCGGGGAAAATAAATAAAACGTTGTATCTGCTTAATTATATTGATGATGAAGATTAT
CGCCGCCGCATCCTGACCCAACTCAACAGGGGAGAAAGCCGACATGCTGTAGCCAGAGCGATTTGCCACGGGCAAAAAGG
TGAAATCAGGAAACGCTATCAGGATGGGCAGGAGGATCAGTTGGGGGCGCTGGGGCTGGTGACAAATGCTGTCGTTCTCT
GGAATACCATCTATATGCAGGCTGCACTGGATCATTTACGTAATGAAGGTGAACCCATAAATGAAGAGGATGAAGCCAGA
CTTTCGCCACTGAGGCATGCGCATATCAACATGCTGGGGCATTACACGTTCGCACTTGCGGAGCAGGTAACAAAAGGCCA
TCTAAGGCCACTGAAGCAAGCAGAAGAAACGGATGAATGGCCTCTGTGA

Protein sequence :
MPADFLNAEQRASYGQFSGEPNDVQLARFFLLDEADMEFINNRRGRANRFAVALMIGCVRFLGTWLHDLSSIPANAQWFV
ARQLGISDTSVLADYSRRETTLREHQALIRRQYGYRDFSWPWTFRLSRLLFTRCWLSNERPGLLFDLATRWLLQNKILLP
GVTTLTRLISQIREKSADRLWNRLSGLVSDAQNAQLEELLLVPEGARNSRFDQLRKGPVAISGPAFNQAVARYLKLKAYG
IQSIDFTGIPPVRFNTLAQYADITSVYKIARMSPARRTAMLVAFVRSCEISALDNALDVLDGVIADIGREAKKIGQKKRL
RTLKDLDKSALELANICQMLLDENIDSELVRATIFERYPPSRLADTIGFINAIARPPDASFHDEMVEQYGRVRRFLPCLL
ENIEFSATPAGETTLEAIRYLAAIRSTRRQHIDDAPMAIVTGPWKRLCYGKDGHISRQGYTLCVMNKLQDCLRRRDIYVP
QSGRWGDPRALLLQGQDWHASRVQVYRSLVHSLNASEAVSALTQQLDTAYRQVAKNFADNQAVSLDFSGKRPKLTIANLN
GLDESPTLKSLAERVSGLLPVVDLTELLLEINAHTGFAEEFTHASEEGARMEDLTVSICAVLLAEACNIGMEPFIRPNVP
ALTRHRLSWTRQNYLRAETLVKANARLVDYQSTLLLAQKWGGGEVASADGMRFIAPVRTVHAGPNRKYFGSGRGLTWYNF
ISDQYSGFHGIVVPGTLRDSIFVLEGLLEQQTGLNPTEIMTDTAGSSDLIFGLFWLLGYQFSPRLADAGASVFWRTDKDA
DYGVLNDLARNTANTRKIEQHWDDMMRMAGSLTLGKIRASVAIRSLLSSERPSGLTQAIIEAGKINKTLYLLNYIDDEDY
RRRILTQLNRGESRHAVARAICHGQKGEIRKRYQDGQEDQLGALGLVTNAVVLWNTIYMQAALDHLRNEGEPINEEDEAR
LSPLRHAHINMLGHYTFALAEQVTKGHLRPLKQAEETDEWPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS15 CAJ77073.1 Insertion sequence Not tested AbaR1 Protein 0.0 69
tnpA AFV53105.1 transposase Not tested AbGRI2-1 Protein 0.0 65
tnpA ACN81014.1 transposase Not tested AbaR5 Protein 0.0 65
ABTW07_3870 YP_005797118.1 transposase IS26 Not tested AbaR4e Protein 0.0 65
1_314 CAJ77075.1 Transposase Not tested AbaR1 Protein 0.0 65
unnamed ACF06166.1 transposase Not tested Tn5036-like Protein 0.0 64