Gene Information

Name : tnpR (ETEC_p948_0850)
Accession : YP_006203892.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : putative resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 70997 - 71563 bp
Length : 567 bp
Strand : -
Note : -

DNA sequence :
ATGCTGATCGGATACGCCCGGGTCTCAACCGATGACCAGAATCTGGATTTGCAGCGGGATGCGCTTCAGGCTACAGGGTG
CGGAAAAATATTCGAAGACCAGATCAGTGGAGCCAAAGCTGAACGCCCAGGGATACAGGCTGCACTCCACTTTGCCCGCC
CCGGAGACACCCTGGTGATCTGGCGACTGGATCGTCTGAGCCGTTCCCTAAAAGACTTGATTGAAATGGTTAAACATCTG
GAGTCGAAAGGTATCGGTTTAAAAAGCCTTCAGGAATCCATCGACACAACCTCCAGTTCCGGAATGCTGATATTTCATCT
TTTTGGGGCACTGGCAGAATTTGAACGCAACCTGACAAGAGAGAGAACTCAGGCCGGGCTTCAAGCAGCACGAGCCAGAG
GACGTAAGGGCGGCAGGCCGAAAACACTGAGTAAGGATAAACAGGCCCTTGCTGTTCAACTCTATAACGAGAAAAAACAT
ACAGTTGCGCAGATTTGTGTGTTGATGGGGATATCGAGGCCAACGCTGTACAAATACATAGAGTCAGCCAGGTTGTTCAA
GAAATGA

Protein sequence :
MLIGYARVSTDDQNLDLQRDALQATGCGKIFEDQISGAKAERPGIQAALHFARPGDTLVIWRLDRLSRSLKDLIEMVKHL
ESKGIGLKSLQESIDTTSSSGMLIFHLFGALAEFERNLTRERTQAGLQAARARGRKGGRPKTLSKDKQALAVQLYNEKKH
TVAQICVLMGISRPTLYKYIESARLFKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGK07012.1 resolvase Not tested SGI1 Protein 5e-28 57
res AAK02044.1 resolvase Not tested SGI1 Protein 5e-28 57
res AGK07070.1 resolvase Not tested SGI1 Protein 5e-28 57
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 5e-28 57
res AGF34985.1 resolvase Not tested SGI1 Protein 5e-28 57
res AGF35025.1 resolvase Not tested SGI1 Protein 5e-28 57
res AGF35059.1 resolvase Not tested SGI1 Protein 5e-28 57
res AGK06929.1 resolvase Not tested SGI1 Protein 5e-28 57
res AGK06966.1 resolvase Not tested SGI1 Protein 5e-28 57
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-30 53
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 3e-30 53
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 3e-30 53
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 1e-27 51
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 2e-27 51
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 2e-27 51
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 8e-27 49
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 8e-14 41