Gene Information

Name : ETEC_p948_0760 (ETEC_p948_0760)
Accession : YP_006203885.1
Strain :
Genome accession: NC_017724
Putative virulence/resistance : Unknown
Product : IS629 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 64006 - 64824 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
GTGGCCACTCTCTGCCATGTGTTCGGGGTCCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGG
CAGACGGGCTGTATTACGCAGCCAGGTACTTGAACTGCATGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGCCA
CAATGGCAACCCAGAGAGGCTACCAGATGGGGCGCTGGCTTGCTGGCAGACTCATGAAAGAGCTGGGGCTGGTCAGCTGT
CAGCAGCCGACTTACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCCTAACTACCTTGAACGGCAGTTCGCCGT
GACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGTTC
TCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTTACCATGAAAGCACTGGAA
ATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCACAGCGATCAAGGCAGTCATTATACGAGCAGGCAGTT
CCGGCAGTTACTGTGGAGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAAACTGCTGGGATAACAGCCCAATGGAGC
GCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCGGCGACGGGCTATGTAAGCTTCAGCGATGCAGCTCACGCAATAACG
GACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGGGTTACCACCAAACGAATCGGAAAATCG
ATACTGGAAAAAACTCTAA

Protein sequence :
MATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSC
QQPTYRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALE
MAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAIT
DYIVGYYSALRPHEYNGGLPPNESENRYWKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 8e-94 89
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 8e-94 89
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 7e-91 65
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-90 65
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-91 65
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-91 65
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-91 65
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-91 65
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 7e-91 65
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 1e-90 65
Z5089 NP_290241.1 transposase Not tested LEE Protein 6e-67 64
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 4e-67 64
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-65 64
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 1e-65 64
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-66 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-66 63
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-69 63
RS04 AAP82949.1 putative transposase Not tested PAPI-2 Protein 3e-63 54
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETEC_p948_0760 YP_006203885.1 IS629 transposase VFG1484 Protein 4e-94 89
ETEC_p948_0760 YP_006203885.1 IS629 transposase VFG1122 Protein 4e-91 65
ETEC_p948_0760 YP_006203885.1 IS629 transposase VFG0785 Protein 3e-67 64