Gene Information

Name : ST398NM01_0583 (ST398NM01_0583)
Accession : YP_006194656.1
Strain : Staphylococcus aureus 71193
Genome accession: NC_017673
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 490616 - 492163 bp
Length : 1548 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGAGTGTACCAGTTGGAATACTAAAGGATTACAACAAGTTAAAGGAGAGAAAGTTATGTCAGAAGAAATGAATGA
CCAAATGTTGGTTCGACGTCAAAAATTACAAGAATTATATGATCTTGGTATAGACCCGTTTGGTTCTAAATTTGACCGTT
CAGGTTTATCTAGTGATTTGAAAGAAGAGTGGGACCAGTATTCTAAAGAAGAATTGGTAGAAAAAGAAGCGGATAGTCAT
GTCGCTATAGCTGGACGATTAATGACTAAGCGTGGTAAAGGTAAAGCAGGATTTGCACACGTTCAGGACTTAGCTGGACA
AATTCAAATATACGTTCGTAAAGATCAAGTTGGCGATGACGAATTTGATTTATGGAAAAATGCTGATTTAGGCGATATCG
TTGGTGTTGAAGGTGTAATGTTCAAAACAAATACTGGCGAATTATCGGTTAAAGCGAAGAAATTCACGCTACTAACTAAA
TCATTGCGACCATTACCGGATAAATTCCACGGTTTACAGGATATCGAACAGAGATATCGTCAAAGATATTTAGATTTAAT
TACGAACGAAGATAGCACTCGTACATTTATTAATCGTAGTAAAATCATTCAAGAAATGCGTAATTATTTAAATAATAAAG
GTTTCTTGGAAGTAGAAACACCTATGATGCACCAAATTGCTGGTGGCGCAGCTGCTAGACCATTTGTAACACATCATAAT
GCATTAGATGCAACGTTATACATGCGTATTGCTATTGAGTTGCATTTAAAACGTTTAATTGTCGGTGGACTTGAAAAAGT
ATATGAAATTGGTAGAGTATTCCGTAATGAAGGTGTATCAACTAGACATAATCCTGAATTCACAATGATTGAATTATATG
AAGCATATGCAGATTATCATGACATTATGGATTTAACAGAATCTATGGTGAGACATATTGCCAATGAAGTATTAGGTTCT
GCAAAAGTACAATACAATGGGGAAACGATTGATTTAGAATCTGCTTGGACTCGTTTGCATATTGTTGATGCTGTAAAAGA
AGCTACTGGTGTAGATTTTTATGAAGTTAAAAGTGATGAAGAAGCTAAAGCTTTAGCTAAGGAACATGGTATTGAAATTA
AAGATACAATGAAATATGGTCATATTTTAAATGAATTCTTTGAGCAAAAAGTTGAAGAAACACTTATTCAGCCAACGTTT
ATCTATGGTCATCCGACTGAAATTTCACCTTTAGCGAAGAAAAATCCTGAAGATCCTAGATTTACTGATCGTTTCGAATT
GTTCATTGTAGGTAGAGAGCATGCAAATGCATTTACTGAATTAAATGATCCTATTGATCAAAAAGGTCGCTTTGAAGCGC
AACTTGTTGAAAAAGCGCAAGGTAATGATGAAGCGCATGAAATGGATGAAGATTACATTGAAGCGTTAGAATATGGCATG
CCTCCGACAGGTGGTCTTGGTATCGGTATTGACAGATTAGTTATGTTATTAACTGACTCTCCATCGATCAGAGACGTATT
ATTATTCCCTTATATGAGACAAAAATAA

Protein sequence :
MFECTSWNTKGLQQVKGEKVMSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEWDQYSKEELVEKEADSH
VAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEFDLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTK
SLRPLPDKFHGLQDIEQRYRQRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTHHN
ALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYHDIMDLTESMVRHIANEVLGS
AKVQYNGETIDLESAWTRLHIVDAVKEATGVDFYEVKSDEEAKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTF
IYGHPTEISPLAKKNPEDPRFTDRFELFIVGREHANAFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDEDYIEALEYGM
PPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 8e-120 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST398NM01_0583 YP_006194656.1 lysyl-tRNA synthetase VFG1668 Protein 5e-120 50