Gene Information

Name : ST398NM01_1158 (ST398NM01_1158)
Accession : YP_006195224.1
Strain : Staphylococcus aureus 71193
Genome accession: NC_017673
Putative virulence/resistance : Virulence
Product : alpha-hemolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1076969 - 1077970 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
TTGTTTCCTCAAATCGTTTTAAAAAATAGAAGGATGATGAAAATGAAAACACGTATAGTCAGCTCAGTAACAACAACACT
ATTGCTAGGTTCTATATTAATGAATCCTGTCGCTAATGCCGCAGATTCTGATATTAATATTAAAACCGGTACTACAGATA
TAGGAAGCAATACTACAGTAAAAACAGGTGATTTAGTCACTTATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTAT
AGTTTTATCGATGATAAAAATCACAATAAAAAAATATTAGTCATCAGAACGAAAGGTACCATTGCTGGTCAGTATAGAGT
TTATAGCGAAGAAGGCGCTAATAAAAGCGGTTTAGCCTGGCCTTCAGCATTTAAGGTACAGTTGCAACTATCTGATAATG
AAGTAGCACAAATTTCTGATTACTACCCTAGAAATTCAATTGATACTAAAGAATATATGAGTACATTAACTTATGGATTC
AACGGTAACGTGACTGGTGATGATTCTGGAAAAATTGGCGGTTTGATTGGTGCAAATGTTTCAATTGGTCATACGCTCAA
ATATGTTCAACCAGATTTCAAAACAATTTTAGAAAGTCCAACTGATAAAAAAGTAGGTTGGAAAGTTATATTTAACAATA
TGGTGAATCAAAATTGGGGACCATATGACAGAGATTCTTGGAACCCAGTATACGGCAATCAACTTTTCATGAAAACAAGA
AACGGTTCAATGAAAGCAGCAGATAACTTCCTTGATCCTAACAAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGA
CTTCGCTACAGTTATTACTATGGATAGAAAAGCATCCAAACAACAAACAAATATAGATGTAATATACGAACGAGTTCGTG
ATGACTACCAATTGCATTGGACTTCAACAAATTGGAAAGGTACCAATACTAAAGATAAATGGACAGATCGTTCTTCAGAA
AGATATAAAATCGATTGGGAAAAAGAAGAAATGACAAATTAA

Protein sequence :
MFPQIVLKNRRMMKMKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFY
SFIDDKNHNKKILVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLSDNEVAQISDYYPRNSIDTKEYMSTLTYGF
NGNVTGDDSGKIGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTR
NGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSE
RYKIDWEKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 7e-144 99
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 6e-144 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 8e-146 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-143 99
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-143 99
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 7e-144 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ST398NM01_1158 YP_006195224.1 alpha-hemolysin VFG1293 Protein 3e-144 99