Gene Information

Name : B2K_35815 (B2K_35815)
Accession : YP_006193777.1
Strain : Paenibacillus mucilaginosus K02
Genome accession: NC_017672
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8408158 - 8410602 bp
Length : 2445 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGATGTTTGGCAGATTTACGGAACGCGCACAGAAAGTGCTCTCTTTGGCTCAAGAAGAAGCGGTACGCTTGGGACATAA
CAATATCGGCACAGAGCATATCCTGCTCGGCCTGATTCGTGAAGGCGAAGGGATTGCAGCGAAGGCGCTGATTGCGCTGG
GTCTTGGACTTGAGAAAATCCAGGATGAAGTGGAATCCCTGATCGGCAGAGGTCAAGAACAGCCCTCCAATATTGCTTAC
ACCCCGCGGGCGAAAAAAGTCATCGAGCTGTCGATGGATGAAGCCCGCAAGCTGGGACACACGTATGTGGGGACGGAGCA
TATCCTGCTCGGTCTGATCCGTGAGGGAGAAGGCGTCGCTGCACGCGTGCTCGGCAACCTGGGCGTAAGCCTCAACAAGG
CACGCCAGCAGGTGCTTCAGCTGCTTGGCAGCAGCGAAGTAGTCTCGCCGAATCATGGTAACCCGGCCAATGTGAATACG
CCGACGCTGGACGGCCTGGCCCGTGACCTGACGGCTTACGCCAAGGAAGGTAACCTCGATCCGGTCATCGGCCGGAGCAA
GGAAATTGAGCGCGTAATTCAGGTGCTCAGCCGCCGGACGAAGAACAACCCGGTTCTGATCGGGGAACCCGGCGTAGGTA
AGACGGCAATTGCCGAAGGATTGGCCCAGAAAATCGTCGCCAACGAAATTCCGGAAACGCTTCGTGACAAGCGCGTCATG
ACGCTGGATATGGGATCCGTGGTAGCCGGTACGAAGTACCGCGGCGAATTCGAGGACCGTCTCAAGAAGATCATGGACGA
AATTCGTCAAGCCGGCAACATCGTGCTCTTCATCGATGAGCTTCACACGCTGATCGGTGCAGGGGGAGCGGAAGGCGCGA
TTGACGCTTCCAACATCCTGAAACCTGCTCTTGCCCGCGGCGAGCTGCAGTGCATCGGGGCCACGACGCTGGACGAATAC
CGCAAATATATTGAGAAAGACGCAGCTCTGGAGCGCCGCTTCCAACCGATTACGGTGGATCAGCCATCGCCGGACGAAGC
GATCCAGATCCTGCACGGTCTGCGTGACCGTTACGAAGCGCATCACCGGGTGAAAATCACCGATGAGGCCATCGAACAGG
CTGTGAAGCTGTCAGACCGCTACATTACGGACCGCTTCCTACCGGACAAAGCGATTGACTTGATCGACGAGGCGAGCTCC
AAAGTGAGGCTCCGCTCCTATACGGTACCGCCGGATCTGAAGAAGCTCGAAAGCCGGCTTGAGGATATCCGCAAGGAGAA
GGATGCTGCGGTGCAGAGCCAGGAGTTCGAGAAGGCCGCATCCCTGCGGGACACGGAACAGAAGCTGCGTGAAGAGCTCG
ATTCCACGAAGAATGAGTGGAAGGAGAAGCAGGGCCGCACGGACTCCGAAGTGACACCGGATGACATTGCCCAGGTAGTC
GCAAGCTGGACCGGCATTCCGGTCGTGAAGCTGGCGGAGGAAGAGACGCAGCGCCTGCTTCAGATGGAATCGATCCTTCA
CGACCGGGTCATCGGTCAGGATGAAGCCGTTAAGGCCGTATCCCGTGCCATCCGCCGGGCGAGAGCAGGTCTCAAGGATC
CGAAGCGTCCGATGGGCTCCTTCATCTTCCTTGGTCCTACAGGGGTAGGTAAAACCGAGCTTGCCCGTGCGCTTGCCGAA
TCTCTGTTCGGTGATGAAAACTCCGTGATCCGGATCGACATGTCCGAGTATATGGAGAAGCATTCCACCTCCCGTCTGGT
AGGGGCGCCTCCAGGATATGTCGGCTACGAAGAAGGCGGCCAGCTCACCGAGAAAGTACGCCGCAAGCCTTACTCGGTCG
TGCTTCTCGATGAGATCGAGAAAGCTCACCCGGAAGTGTTCAACATTCTTCTGCAGGTGCTGGAAGACGGCCGTCTGACC
GATTCCAAGGGACGTACGGTAGACTTCCGCAACACCCTGATCATCATGACATCCAACGTCGGTGCCGATGTCATCAAGAA
GAACTCGACCCTCGGCTTTACCGCCACGATTGATGCCGGCAAAGAGTACGGCAATATGAAGGATAAGGTCATGGGCGAGC
TCAAGAAGAGCTTCCGTCCGGAGTTCCTGAACCGGATCGACGAGATTATCGTGTTCCACTCCCTGGACGAAGCGCACATC
GGTCAGATCGTTTCCCTCATGGCGGAGGAACTCCGCAAGCGCCTGAAAGAGCAGGAAGTGGACTTTGTTCTGACGGATGC
GGCCAAGGCCTTCCTTGCCAAAGAAGGCTATGATCCTTCCTTCGGTGCAAGACCGCTTCGCCGGGCGATCCAGAAGCATA
TCGAAGACCGCCTCTCCGAAGAGCTGCTCCGCGGCAACATCAGCAAAGGAGATACGCTCACGATCGACGAGAAAGATGGA
GACCTCGTGGTCGAGCGTACCCAAGGGGTAACATCGCAGGCATAA

Protein sequence :
MMFGRFTERAQKVLSLAQEEAVRLGHNNIGTEHILLGLIREGEGIAAKALIALGLGLEKIQDEVESLIGRGQEQPSNIAY
TPRAKKVIELSMDEARKLGHTYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVLQLLGSSEVVSPNHGNPANVNT
PTLDGLARDLTAYAKEGNLDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQKIVANEIPETLRDKRVM
TLDMGSVVAGTKYRGEFEDRLKKIMDEIRQAGNIVLFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKYIEKDAALERRFQPITVDQPSPDEAIQILHGLRDRYEAHHRVKITDEAIEQAVKLSDRYITDRFLPDKAIDLIDEASS
KVRLRSYTVPPDLKKLESRLEDIRKEKDAAVQSQEFEKAASLRDTEQKLREELDSTKNEWKEKQGRTDSEVTPDDIAQVV
ASWTGIPVVKLAEEETQRLLQMESILHDRVIGQDEAVKAVSRAIRRARAGLKDPKRPMGSFIFLGPTGVGKTELARALAE
SLFGDENSVIRIDMSEYMEKHSTSRLVGAPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLT
DSKGRTVDFRNTLIIMTSNVGADVIKKNSTLGFTATIDAGKEYGNMKDKVMGELKKSFRPEFLNRIDEIIVFHSLDEAHI
GQIVSLMAEELRKRLKEQEVDFVLTDAAKAFLAKEGYDPSFGARPLRRAIQKHIEDRLSEELLRGNISKGDTLTIDEKDG
DLVVERTQGVTSQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 60
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-99 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B2K_35815 YP_006193777.1 ATP-dependent Clp protease ATP-binding protein VFG0079 Protein 0.0 76
B2K_35815 YP_006193777.1 ATP-dependent Clp protease ATP-binding protein VFG0080 Protein 1e-157 53