Gene Information

Name : fecD (B2K_29220)
Accession : YP_006192497.1
Strain : Paenibacillus mucilaginosus K02
Genome accession: NC_017672
Putative virulence/resistance : Virulence
Product : iron-dicitrate ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6901568 - 6902548 bp
Length : 981 bp
Strand : +
Note : Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to

DNA sequence : 
ATGAACAAAAGCATCGTACTGGCCGCTTCGCTGCTGGCCCTGCTCCTGCTGACGGTCCTCTCCGTTCGGGTCGGCGCCGT
GCCCGTGCCCTTCGGCGACATCGGGTCTACATTGCTCGGGGAACCGAACAAGTCCTATTTCATCGTGCATGACGTGCGTC
TGCCCCGGGTGCTTGTCGCCATCCTGGCAGGCATGGGGCTGGCCGTCGGCGGCGTGATCCTGCAGGGCCTCGTGCGCAAC
CCGCTGGCGAGCCCCGACGTCATCGGCATCACGAAGGGAGCCGGCTTTGCGGCGGCAGCGCTGATCTTCCTGTTCCCGGG
TGCGCCGGGCTATGCCCTGCCCATGGCCGCCTTCGCCGGGGCCCTCGCCGCTTTCGCCATTCTGCTTGGGCTCAGCCGCA
GGCTTACTCTGAGCCCTTCCGCCCTCGCCCTGACCGGCATCGCCGTCGGAGCCGTCTTCCAGGCCGGCACGCAGTATCTG
ATCGTCTCGCATCCGGCCGACGTCAGCATGGCGCTGCTCTGGATGACCGGCAGCCTGTGGAGCCGGCGCTGGAAGGATGT
GCTCACCCTGCTGCCCTGGATCGTGGTGCTCGTGCCGCTCGTGTGGAGGCTGTATCCGAAGCTCAACGTGCTGCAGTTCG
GCGACGAGACCGTCACTTCCCTGGGGGTCAACCTTCGGGGCGAACGCCTCCTCCTGCTGCTTCTGGCCGTCGCCCTCGCC
GGCATCTCCGTCTCTGCGGTCGGAGCCATCGGCTTCATCGGACTCGTCGCCCCGCACATCGCCCGGAGCCTCGTCGGGGC
GAAGCACCAGTGGCTCATCCCGGTCGCCGCGCTCCTCGGCGCGGACCTCATGCTGCTCGGCGATGCGGTCGGACGGATCG
TCATCATCCCGCGCGAGGTGCCGGTCGGCATCATGACGGCGGTTATCGGGGCGCCTTACTTCATCTATCTGCTGCAAAAG
GAGCGGTGGAAGCTGAGGTGA

Protein sequence : 
MNKSIVLAASLLALLLLTVLSVRVGAVPVPFGDIGSTLLGEPNKSYFIVHDVRLPRVLVAILAGMGLAVGGVILQGLVRN
PLASPDVIGITKGAGFAAAALIFLFPGAPGYALPMAAFAGALAAFAILLGLSRRLTLSPSALALTGIAVGAVFQAGTQYL
IVSHPADVSMALLWMTGSLWSRRWKDVLTLLPWIVVLVPLVWRLYPKLNVLQFGDETVTSLGVNLRGERLLLLLLAVALA
GISVSAVGAIGFIGLVAPHIARSLVGAKHQWLIPVAALLGADLMLLGDAVGRIVIIPREVPVGIMTAVIGAPYFIYLLQK
ERWKLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 6e-27 44
DIP0584 NP_938960.1 iron transport system membrane protein Virulence Not named Protein 5e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecD YP_006192497.1 iron-dicitrate ABC transporter permease BAC0163 Protein 2e-27 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecD YP_006192497.1 iron-dicitrate ABC transporter permease VFG1043 Protein 4e-27 44