Gene Information

Name : B2K_23355 (B2K_23355)
Accession : YP_006191359.1
Strain : Paenibacillus mucilaginosus K02
Genome accession: NC_017672
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5539999 - 5542140 bp
Length : 2142 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCGCTGTCAACATTGCCATACGCAAGAAGCCGCCGTATCCCTGCATCTTCAGGTCAACACCCAAGTGGAGAAGCTCCA
GCTGTGCAGAGACTGCTATGCCAAGCTCGGCAGCGGAATCCCCTTCCCTGCGGGGGCTGGGTCCTTCCCGCACATGCCAT
CCTTGGACGATCTGTTCAAAGGCCTGATGCAGCCTCCGAAGGGGCAGGAGCCGCAGCACCAAGCCGGCCGGACCGCCGGC
AAACGCGGCGGCATCCTCGACGGAATCGGCCGGAATCTGAACGACGCGGCCAAAGCCGGCCTGATCGACACCGTGATCGG
ACGCGACGAAGAGATCGACCGCGTCATTGAGATCCTGAACCGCCGCACGAAGAACAACCCGGTGCTGATCGGCGAGCCGG
GCGTCGGGAAGACGGCCATTGCCGAAGGGCTGGCCCTGCGTATCACCGAAGGCAAGGTTCCTGCCAAGCTGCTCGGCAAG
GAAGTGTATTCCCTGGACGTAGCCTCCCTGACGGCGGGCACGGGGATTCGCGGCCAGTTCGAGGAGAAGCTGAAAGGGCT
GATATCCGAGCTGCAGCAGCGCCAGAACGTCATCCTGTTCATTGACGAAATTCACACGCTGGTCGGGGCGGGTTCCGCCG
AAGGCTCGATGGACGCCGGGAACATCCTGAAGCCGGCTCTGGCCCGCGGCGAGCTGCAGGTCGTCGGCGCCACGACGCTG
AAGGAGTACCGCCGCATCGAGAAGGATGCCGCACTGGAGCGCCGCTTCCAGCCGGTCACGGTCGACGAGCCGACAGTGGA
GGAGGCCGTGGAGATCCTGAAGGGACTGCGACCGAAGTATGAAGAATACCACCAGGTGACCTACTCGGAAGAGGCGATCC
GTGCCTGCGTGCTCCTCTCCCACCGTTACATCCAGGACCGCTTCCTGCCGGACAAAGCGATCGACCTGCTCGACGAAGCG
GGCGCCAAGCTGAATCTGCAGGGCGCAGGCGGCGGGGAAGCTGCGATCCGCACCCGGCTCTCCGGCATCCAGGAAGAGAA
GCGCCAGGCGACGCTGGCCGAGGACTACGAGCTCGCCGCACGGCTGCGTGACGAAGAGGCGAACCTGCTTCAGCAGCTGG
ACGAGCAGCGGCCGCAGGCGGCATCGGAAGTCCGCGTCGAGCACATCCAGGCCATCGTGGAACGGAAGACCGGCATCCCG
GTCGGCAAGCTGCAGCAGGACGAAGCGGCCAAGCTGAAGGACCTCGCCCGGCATCTCGAAGCGAAGGTCATCGGGCAGCC
GGAGGCCGTGCGCCAGGTGGCCCGGGCCGTCCGCCGCAGCCGCGCGGGACTGGCGCCGAAGAACAAGCCGATCGCCTCCT
TCCTGTTCGTCGGCCCGACCGGCGTCGGCAAGACCGAGCTGTCGAAGTCGCTCGCCGAAGAGCTGTTCGGAAGCGCGGAT
GCGATGATCCGTCTGGACATGAGCGAATACATGGAGAAGCACTCCGTATCCAAGCTCATCGGCTCGCCTCCAGGCTATGT
CGGCCATGAAGAAGCCGGGCAGCTGACCGAACGCGTACGCCGCAATCCGTACAGCATTATCCTGCTCGACGAGATCGAGA
AGGCGCACCCGGACGTGCAGCACATGTTCCTGCAGGTGCTCGAAGACGGGCGCCTGACCGACAGCCAGGGACGCACGGTC
AGCTTCAAGGATACGGTGATCATCATGACATCCAATGCCGGAGTGACCGACAGGAAGAAAATCACCGTAGGCTTCTCCGC
CGAAAAGAGCACGCAGACCGGCTCGCTGCCGGAATCGCTCGGCTCCTACTTCCGTCCGGAGTTCCTGAACCGCTTTGATG
CGATCATTCCGTTCGCCTCCCTGCAGGAGACGGATCTCATCCGCATCGTCGACAAGATGCTCGCGGAAGTCACGAGCACG
CTGCAGGAGCAGAACATCACCCTTCACGTGACGGACGAAGCGAAGCGCAAGCTTGCCGAGCTCGGCTATCATCCGTCCTT
CGGGGCGCGTCCGCTCCGCCGGGTGATCCAGCAGCACATCGAAGACGGCATCACGGATCTCATCCTCGAGCAGGAGCAGG
TGCAAGAGATCCGGGTCGAGGTCCGGGAGAACGGGATCTCCGTTCAGGCACTGCCATCGTAA

Protein sequence :
MRCQHCHTQEAAVSLHLQVNTQVEKLQLCRDCYAKLGSGIPFPAGAGSFPHMPSLDDLFKGLMQPPKGQEPQHQAGRTAG
KRGGILDGIGRNLNDAAKAGLIDTVIGRDEEIDRVIEILNRRTKNNPVLIGEPGVGKTAIAEGLALRITEGKVPAKLLGK
EVYSLDVASLTAGTGIRGQFEEKLKGLISELQQRQNVILFIDEIHTLVGAGSAEGSMDAGNILKPALARGELQVVGATTL
KEYRRIEKDAALERRFQPVTVDEPTVEEAVEILKGLRPKYEEYHQVTYSEEAIRACVLLSHRYIQDRFLPDKAIDLLDEA
GAKLNLQGAGGGEAAIRTRLSGIQEEKRQATLAEDYELAARLRDEEANLLQQLDEQRPQAASEVRVEHIQAIVERKTGIP
VGKLQQDEAAKLKDLARHLEAKVIGQPEAVRQVARAVRRSRAGLAPKNKPIASFLFVGPTGVGKTELSKSLAEELFGSAD
AMIRLDMSEYMEKHSVSKLIGSPPGYVGHEEAGQLTERVRRNPYSIILLDEIEKAHPDVQHMFLQVLEDGRLTDSQGRTV
SFKDTVIIMTSNAGVTDRKKITVGFSAEKSTQTGSLPESLGSYFRPEFLNRFDAIIPFASLQETDLIRIVDKMLAEVTST
LQEQNITLHVTDEAKRKLAELGYHPSFGARPLRRVIQQHIEDGITDLILEQEQVQEIRVEVRENGISVQALPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 9e-148 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B2K_23355 YP_006191359.1 ATP-dependent Clp protease ATP-binding protein VFG0080 Protein 0.0 61
B2K_23355 YP_006191359.1 ATP-dependent Clp protease ATP-binding protein VFG0079 Protein 3e-154 54