Gene Information

Name : pykA (SMD_3401)
Accession : YP_006186083.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 3789994 - 3791460 bp
Length : 1467 bp
Strand : -
Note : -

DNA sequence :
ATGTTCGAGCGTCAGCGTCGCACCAAGATCCTTGCCACCCTCGGTCCGGCCACTGATCCGCCGGGCGTGCTGGAGGATCT
TTTCCGCGCCGGCGTCAATGTGGTGCGCCTGAACTTCAGCCATGGCGATCCGTCCGGCCAGGCCAAGCGTGCCGCCGAAG
TGCGTGCTGCTGCGGCCCGCGTAGGCGTGGAAGTGGGCATCCTGGCCGACCTGCCGGGCCCGAAGATCCGCATCGAGCGC
TTCGCCGAAGGCAAGGTGCAGCTGAAGGCGGGTGACCGCTTCGACCTGATCGCCAGCGAGAACGCCGGCCCGGGCAACGC
CAGCCAGGTGGGCGTGAGCTACCTCGGCCTGCCGCAGGACGTGGGCCCGGGTGATGTGCTGCTGCTCGACGACGGCCTGA
TGCAGCTGCAGGTGGTGGAAGTGCAGGGCGAGCGCATCGTCAACACCGTGCTCAACGATGGTGTGTTGTCCGACCGCAAG
GGCCTGAACAAGCAGGGCGGCGGCCTGTCGCTGGGTGCCCTGACCGAGCGCGACAAGGAACTGATCGGTATCGTTGCGAA
GATCGGCGTGGACTTCATCGCCGTGTCGTTCTGCCGCAACGCGCAGGACATGAACGACGCGCGCGACATCGCCCGCTCGC
ACGGCTGTGATGCCGCCCTGGTGTCGAAGATCGAGCGCACCGAGGCGATCGAGAACCTGGAAGAAATCGTCGAGGCCAGC
GACGTGGTGATGGTTGCCCGTGGCGACCTTGGCGTGGAAATCGGCGATGCCGAGCTGCCGGGCCTGCAGAAGAAGATCAT
CAAGGCCTCGCTGGCGCAGAACAAGGTGGTGATCACCGCCACGCAGATGCTGCAGTCGATGGTGGAAAGCCCGATCCCGA
CCCGCGCCGAAGTGCTGGACGTCGCCAACTCGGTCATCGACGGTACCGACGCGGTGATGCTGTCGGCGGAAACCGCCGCC
GGTGCCTACCCGGTCAAGGCGGTGGAAGCGATGGCACGCATCTGCCTGGGTGCCGAGCGCCAGTTCCAGACCGAGACCGA
TTTCAACGCCTCGCCGCGCAACCTGGAACGTGCCGACCAGGCAATTGCCATGGCCACCATGTTCCTGTCGCAGCATGTGG
GCGTGCGCGCGATCGTGGCCATGACCGAATCCGGCGGCACCGCGCGTTACCTGTCGCGTTTCCGCGCCAAGGCGCCGGTG
TTCGCGGTCACCCGCCATGACGGTGCGCGTCGCCAGATGGCGCTGATGCGCGATGTGTTCCCGATCAACTTCGACAGCCG
CGGCCTGACCCCGCGCGAAGCGGCGCGCGGCAGCATCCGCCTGCTGGTCGAATCGGAACTGCTGCAGGCCGGTGACCGCG
TTGTGTTTACCAGCGGCGAGCACATGGAAACCCACGGTGCCACCAACACCCTGCGCCTGCTGGAAGTGGGCGAGGATGGC
CGCGCCATCGGCCTGGGCGATCTGTAA

Protein sequence :
MFERQRRTKILATLGPATDPPGVLEDLFRAGVNVVRLNFSHGDPSGQAKRAAEVRAAAARVGVEVGILADLPGPKIRIER
FAEGKVQLKAGDRFDLIASENAGPGNASQVGVSYLGLPQDVGPGDVLLLDDGLMQLQVVEVQGERIVNTVLNDGVLSDRK
GLNKQGGGLSLGALTERDKELIGIVAKIGVDFIAVSFCRNAQDMNDARDIARSHGCDAALVSKIERTEAIENLEEIVEAS
DVVMVARGDLGVEIGDAELPGLQKKIIKASLAQNKVVITATQMLQSMVESPIPTRAEVLDVANSVIDGTDAVMLSAETAA
GAYPVKAVEAMARICLGAERQFQTETDFNASPRNLERADQAIAMATMFLSQHVGVRAIVAMTESGGTARYLSRFRAKAPV
FAVTRHDGARRQMALMRDVFPINFDSRGLTPREAARGSIRLLVESELLQAGDRVVFTSGEHMETHGATNTLRLLEVGEDG
RAIGLGDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 5e-71 47
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-59 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-60 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-60 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_006186083.1 pyruvate kinase VFG0479 Protein 3e-60 41