Gene Information

Name : hydG (SMD_3357)
Accession : YP_006186041.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : type IV fimbriae expression regulatory protein PilR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3740961 - 3742334 bp
Length : 1374 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTACTGACGCTCGGCCGCAT
GGGGCTGCGCATCAGTACGGCAGCCAACCTTGCCGAAGCGCGCGAACTGCTTGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCGGACGGCAATGGCATCGAGCTGGTCAGCGAGATCGCGCAGCACTACCCGCGCACGCCAGTGGCG
ATGATCACCGCCTTCGGCAGCATGGACCTGGCCGTGGAAGCGCTGAAGGCCGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGATATCGCCGTGCTGCGCGGCCTGGTCAAGCACGCGCTGGAACTGAACAACACCGAGCGCCCTGCACCCGGCCCCGCCG
CCGAACAGGGCGCACGCCTGCTGGGCGATTCGCCGGCCATGGACGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAATCCGGCGTGGGCAAGGAGCTGGTCGCACGAACCATCCACGCCCAGGGCGCCCG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAAAGCGAATTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGCGCCCACGCCGACAAGCCCGGGCTGTTCCAGGCCGCGCATGGCGGCACCCTGTTCCTCGACGAA
GTGGCCGAGCTGCCGCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAATCAGTGCGCGCGGTGGGCGCGGC
TACCGAGGAGCCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGACGGGCGCTTCC
GCCACGACCTCTACTACCGCATCAACGTGATCGAACTGAGGGTGCCGCCGCTGCGCGAGCGTCGCCAGGACCTGCCGGAA
CTGGCCGCATCGGTACTGGCACGGCTGGCCCGCAGCCATGGCCGCCCGACGCCGTTGCTGGCGCCGTCGGCGCTGGACGC
ACTGGCCCAGTACGCCTTCCCTGGCAACGTGCGCGAATTGGAGAACATCCTGGAACGCGCGCTGGCCCTGGCCGAAGAAG
ACCGCATCGGCGCCGACGACCTGCGCCTGCCGCAGCATGCCCCGCGCACGCCCGGCAGCGCAGCACACGCCGAGGCCGTG
GTGGACCTGCAGCCCGGCAGCGCCGCCCTGCCCTCGTACATCGAACAGCTCGAGCGCAGCGCCATCCAGCGCGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCCGCGCAGCTGGGCATCACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Protein sequence : 
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNTERPAPGPAAEQGARLLGDSPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAATEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELRVPPLRERRQDLPE
LAASVLARLARSHGRPTPLLAPSALDALAQYAFPGNVRELENILERALALAEEDRIGADDLRLPQHAPRTPGSAAHAEAV
VDLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-97 49
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-97 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hydG YP_006186041.1 type IV fimbriae expression regulatory protein PilR BAC0089 Protein 2e-67 45
hydG YP_006186041.1 type IV fimbriae expression regulatory protein PilR BAC0467 Protein 5e-66 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hydG YP_006186041.1 type IV fimbriae expression regulatory protein PilR VFG1214 Protein 7e-124 63
hydG YP_006186041.1 type IV fimbriae expression regulatory protein PilR VFG0116 Protein 3e-55 42