Gene Information

Name : O (SMD_3272)
Accession : YP_006185957.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Unknown
Product : phage capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3649209 - 3650117 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence :
ATGGGTCATCGCATCGAGAACCGATGCGCAACGACAGCAGAGGGCGAGATGGCCAGCAAAACCAAGAAGCGTTCCGAGTT
CTTCCGTGTTGCCGTCGAAGGCGCCACCACCGATGGGCGAGTGATCGAGCGCCAGCAGATCGCGGACATCGCCGAAACCT
ACGACCCGGAGGTGTACGGCGCACGCATCTGGCTGGAACACTTCCGCAGCACGCTGCCGGACAGCCCGTTCCGCGCCTAT
GGCGACGTGCTGGCGGTGAAGGCCGAGGAAGTCGAAATTGCCGGCAAGAAGAAGCTGGCGCTCTTCGCCCAGGTCGAGCC
GACCGATGACCTGGTCGACATGGTCAACGTGCGCAAGCAGAAGGTCTTTACCAGCATCGAGATTTCCCCGGAGTTCGCCG
ACAGCGGCAAGGCGTACCTGTTCGGCCTGGCCGTGACCGACTCCCCCGCCAGCCTGGGCACCAGCATGCTCGCGTTCTCG
GCCCAGCACCCGGATAGCAGCCCGCTGAAGGACCGCAAGCAGGCACCGGAGAACCTGTTCACCGAGGCCACCGAGACGGT
CATCAAGTTCACCGCCGAGGATGAGTCGGAGGGTCGCCCCGGCCCGGTCGCCGCGTTCCTTTCGAGCCTGGGCCTGGGCA
AGAAGGCAGCGCCGGCGCCTGCCAAGGAAGATCCCGAGTTCAACGTGGCCGAGTTCGCCGCTCAGCTGCTCGGCGCGGTG
GGTGAACAGGATGCGGCCATGGCCAAGCTCGGCCAGGACAACCGCGCACTGCGCGAGCAGGTGCAGGCGCTGTCCACTCA
GGTTGCTGGCCTGCGCAAGAGGCTGGACGACACCCCGCAGGCATTCACCCAGCGTCCGGTTGTTCCGGGTGGCAAGGATG
TGGAAGCCGCCAACATCACCGATTGCTGA

Protein sequence :
MGHRIENRCATTAEGEMASKTKKRSEFFRVAVEGATTDGRVIERQQIADIAETYDPEVYGARIWLEHFRSTLPDSPFRAY
GDVLAVKAEEVEIAGKKKLALFAQVEPTDDLVDMVNVRKQKVFTSIEISPEFADSGKAYLFGLAVTDSPASLGTSMLAFS
AQHPDSSPLKDRKQAPENLFTEATETVIKFTAEDESEGRPGPVAAFLSSLGLGKKAAPAPAKEDPEFNVAEFAAQLLGAV
GEQDAAMAKLGQDNRALREQVQALSTQVAGLRKRLDDTPQAFTQRPVVPGGKDVEAANITDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 3e-46 45
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 2e-41 42
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 2e-41 42