Gene Information

Name : kdpB (SMD_0327)
Accession : YP_006183109.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 382695 - 384752 bp
Length : 2058 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACCCAAGCAAGTTCAACCCGTAGTACCCATGCACCGCGCCCTGCCCTGCTTGATGGCGCCGGCCTGCGCCGTGC
GCTGGTCGAAGCAGTGCGCAAGCTGGCGCCGATGCATCTGGTGCGCAGCCCGGTGATGGCGGTGGTGATGGCCGGCACGA
TCGTCGCCGCGATCGTCACCCTGACCGGCAATGCACCGCTGGGCTTCGGCCTGGCGGTAACCGCCATCCTGCTGGTGACC
GTGCTGTTCGGCAATTTCGCCGAGGCAGTGGCCGAAGCGCGTGGCCGTGGCCAGGCCGCCTCGCTGCGCCGCGCTCGCCA
GGACCTGGTGGCGCGCCGGCTGGCGGCGCCGCAGCCGGGTGCAGCCGAAGCCCAGGTGCCGGCCGCCGAGCTGCGCCCGG
GCGACCATGTGATCGTCAGTGCCGGTGAGCTGGTGCCGGCCGATGGCGAGATCGTGCAGGGCCTGGCCACCATCAACGAA
GCGGCAGTGACCGGCGAATCGGCACCGGTGCTGCGCGAGGCTGGTACCGACCGTTCCGGTGTGATCGGTGGCACCAAGGT
GCTGTCCGACCAGATCATCGTGCGGGTGACCGCCGAGCCGGGCCACAGCTTCCTGGACCGCATGATCGCGCTGGTGGAAG
GTGCCAATCGCCAGAAGACCCCCAACGAGATCGCGCTGACCCTGCTGCTGGCGGCGATGACGCTGACCTTCCTGGTGGTG
GTGGCCACGTTGCCGGCGATCGGCGCGGCCGTGGGCGTGCAGGTCGATCCACTGCTGCTGATCGCACTGCTGGTGTGCCT
GATCCCGACCACCATCGGCGGCCTGCTGCCGGCCATCGGCATCGCCGGCATGAACCGTGCGCTGGCTGCCAACGTGCTGG
CCAAGTCGGGCAAGGCGGTGGAAGTGGCCGGCGACGTCGACGTGCTGCTGCTGGACAAGACCGGCACCATCACCTACGGC
GACCGCCAGGCCAGCCACTTCCATCCGCTGGCCGGCATCGACGCCAGCCAGCTGCGCGAGGCGGCACTGCTGTCCTCGCT
GGCCGACCCGACCCCGGAAGGCAAGTCGATCGTGCGCCTGGCGCGCGAACAGGGCTGCGCCACCGCCGAGCCGGACCGTG
CCGACTACCTGGCCTTCAGTGCCCAGACCCGGATGTCCGGCGTCGATCTGGAACACGGGCGGCAGATCCGCAAGGGCGCT
GCCGATGCGATCCGCACCCACGTGCAGGCGCTCGGCGGCAGCGTGCCGGCTGAACTGGCCGGCCGCGTCGAGCAGGTCGC
GCGCAATGGCGCCACCCCGCTGGTGGTGGCCGAGGGCCGCCACGTGCTGGGCGTGATCGAGCTGTCGGACGTGGTCAAGC
ACGGCATGCGCGAGAAGTTCGCACAGCTGCGGGCGATGGGCATCCGCACGGTGATGATCACCGGCGACAACCCGCTGACC
GCTGCCGCCATCGCCGCCGAAGCGGGCGTTGATGACTACATCGCCGAGGCCCGTCCGGAAGACAAGCTGGCACGCATCCG
CCAGGAACAGGCCGGTGGCCGCCTGGTGGCGATGGTGGGCGATGGCACCAACGATGCTCCCGCGCTGGCCCAGGCCGACA
TCGGCCTGGCGATGAACTCCGGCACGCAGGCGGCGAAGGAGGCCGGCAACATGGTCGACCTCGATTCAGACCCGGCCAAG
CTGCTGGCGGTCGTGGAAGTGGGCAAGCAGCAGCTGATCACCCGCGGTGCGCTGACCACCTTCTCGCTGGCCAACGACGT
GTCCAAGTACTTCGCGATCCTGCCGGCGCTGTTTGCCGCTGCGGTTCCGGCCATGGCCGCACTGAACGTGATGCAGCTGT
CGAGCCCACGCAACGCGGTGCTGGCGGCGCTGATCTTCAACGCGCTGGTGATTCCCGCGCTGATCCCGCTCGCCCTGCGT
GGCGTGCGCTTCCGTCCGGCCACGGCCACCGCGCTGCTGCGCCGGAACATGCTGGTGTACGGCCTCGGCGGCGTGCTGTT
GCCGTTCGCGGCGATCAAGCTGATCGACCTCTTCCTTGTCCTGGTATTCGGCGCATGA

Protein sequence :
MSTQASSTRSTHAPRPALLDGAGLRRALVEAVRKLAPMHLVRSPVMAVVMAGTIVAAIVTLTGNAPLGFGLAVTAILLVT
VLFGNFAEAVAEARGRGQAASLRRARQDLVARRLAAPQPGAAEAQVPAAELRPGDHVIVSAGELVPADGEIVQGLATINE
AAVTGESAPVLREAGTDRSGVIGGTKVLSDQIIVRVTAEPGHSFLDRMIALVEGANRQKTPNEIALTLLLAAMTLTFLVV
VATLPAIGAAVGVQVDPLLLIALLVCLIPTTIGGLLPAIGIAGMNRALAANVLAKSGKAVEVAGDVDVLLLDKTGTITYG
DRQASHFHPLAGIDASQLREAALLSSLADPTPEGKSIVRLAREQGCATAEPDRADYLAFSAQTRMSGVDLEHGRQIRKGA
ADAIRTHVQALGGSVPAELAGRVEQVARNGATPLVVAEGRHVLGVIELSDVVKHGMREKFAQLRAMGIRTVMITGDNPLT
AAAIAAEAGVDDYIAEARPEDKLARIRQEQAGGRLVAMVGDGTNDAPALAQADIGLAMNSGTQAAKEAGNMVDLDSDPAK
LLAVVEVGKQQLITRGALTTFSLANDVSKYFAILPALFAAAVPAMAALNVMQLSSPRNAVLAALIFNALVIPALIPLALR
GVRFRPATATALLRRNMLVYGLGGVLLPFAAIKLIDLFLVLVFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-126 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-126 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-126 54
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-126 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-126 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-126 54
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-127 53
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-127 53