Gene Information

Name : SMD_2454 (SMD_2454)
Accession : YP_006185165.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : two-component system regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2733809 - 2734483 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
ATGACCCGCCTGCTGATCATCGAAGACAACCCCGAGCTGGTTGCCAACCTGTATGCCTTCTTTGAACCGCTCGGCTACGT
GCTGGACGACGCGCGCGACGGCGCCAGTGGCCTGCGCCGGGCCACGCAGCACGACTACGACGCCATCCTGCTGGACCTGA
TGCTGCCGCGCCTGGACGGCATGACGCTGTGCCAGAAGCTGCGCCAGGAGTTCCAGAACCCGGTGCCGATCCTGATGCTG
ACCGCACGCGATCCGGTCGAAGACCGTGTGCAGGGCCTGGCCCTGGGCGCGGATGACTACCTGGTCAAACCGTTCTCGCT
GGTGGAACTGGATGCACGGATCAAGGCCCTCGTACGAAGGGCACAGGGGCGCCAGGTCCAGAGCGTGCTGGCGTGGAAGG
ACCTGCAGGTGGACACGCGCTCGCCACAGGCCTGGCGGCAAGGCCGCTGCATTGCGCTGACGCCCACGTCGCACAAGCTG
CTGATGTGCCTGGTGCGTGCAGCTCCCGCCGTGGTGCGCAAGCAGGAGATGGAATACCTGGTCTGGGGCGACGAGCCACC
GGACAGCGGCGCGCTGCGAACCCACATCCATGAGCTGCGCCTGCAGGTGGACCGCAGCTTCGACACCGCGCTGATCACCA
CGGTGCACAGCGTCGGCTGGCGCATGCAGGCGTGA

Protein sequence :
MTRLLIIEDNPELVANLYAFFEPLGYVLDDARDGASGLRRATQHDYDAILLDLMLPRLDGMTLCQKLRQEFQNPVPILML
TARDPVEDRVQGLALGADDYLVKPFSLVELDARIKALVRRAQGRQVQSVLAWKDLQVDTRSPQAWRQGRCIALTPTSHKL
LMCLVRAAPAVVRKQEMEYLVWGDEPPDSGALRTHIHELRLQVDRSFDTALITTVHSVGWRMQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_2454 YP_006185165.1 two-component system regulatory protein VFG0596 Protein 1e-24 41