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Name : gspE (SMD_2408) Accession : YP_006185120.1 Strain : Stenotrophomonas maltophilia D457 Genome accession: NC_017671 Putative virulence/resistance : Virulence Product : General secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2679843 - 2681276 bp Length : 1434 bp Strand : - Note : - DNA sequence : GTGAGCGCCGCCGCGCCACTGCCGTACGCCTGGGTGCGCAGCCATGGGGTGATGCTGTCCGAGGTTGGCGGTGAGCCTGT GCTGCTGGGTACCGTCGATACCGCAGCATGGGCCGTGGCCGAACTGCGCCGCCGGCATGGACCGTTGCCCTTCCAGGCAC TGGATGCCGCGACGTGGCAGCAGCGGTTGGCTGAGCAGTACCGTGACGGCGGCGACGCCGCTGCCGTGGTCGGTGCCGCC GAGAGCGAAGTCGATCTGGACCGGCTGATGCAGGACATGCCGGAAGTCACCGATCTGCTGGACGCGCAGGATGATGCGCC GGTGATCCGCATGATCAACGCGCTGCTGGCGCAGGCCGCACGCGATGGCGCCAGCGATCTGCACATCGAGCCGTTCGAGA CCCATTCGGTGGTGCGCTACCGGGTGGACGGCACGCTGCGCGACATGGTGCAGCCACGGCGCGCACTGCACGCAGCGCTG GTATCGCGCATCAAGATCATGGCCCACCTGGACATCGCCGAGAAGCGCCTGCCGCAGGACGGGCGCATCGCGATCCGCGT GGGTGGGCGTCCGCTGGATATACGAGTCTCCACGGTGCCGACCGGGCATGGCGAGCGCGCCGTGCTGCGACTGCTGGAGA AGGATGCCGGCCGTCTGCAGCTGCAGCGCCTGGGCATGGCCGATGACACCCTGGCCACGTTCACCGGATTGATCCGGCAG CCGCATGGCATCGTGCTGGTCACCGGCCCGACCGGTAGTGGCAAGACCACCTCGCTGTACGCCGCGTTGGGCCAGCTCGA CAGCAGCACCAGCAACATCCTCACCGTGGAGGACCCGGTGGAGTACGACTTCGCCGGCATCGGCCAGATCCAGGTGAACG CGCGCATCGGCATGAGCTTCGGCACCGCGCTGCGCGCGATCCTGCGCCAGGACCCGGACACCATCATGATCGGCGAGATC CGCGACCTGGAGACCGCACAGATTGCGGTGCAGTCGTCGCTGACCGGCCATGGCGTGCTGGCGTCCCTGCATACCAACGA CGCGATCTCGGCAGTGACGCGCCTGGCCGATATGGGCGTGGAACCGTTCCTGCTGGCCTCGTCGCTGCGCGGTGTGCTGG CGCAGCGGCTGGTGCGGCGGCTGTGCACCCAATGCCGGCGTGCCGAGGTGGATGGGGACGGCCGTACCGTATGGCGCGCG GTGGGTTGCGCGGCCTGTGCCAACAGCGGCTATCGGGGGCGTACCGGCATCCACGAGTTGTTCGTGGTGGACGATCGCGT GCGTACGCTGATCCATGAAGGGCAGGGTGAACCTGCACTGCGCGAGGCGGCGCGGCGTGCCGGCATGCGGACCTTGCGTC AGGACGGCCAGCGTTGGGTCGACAGCGGGGTGACCACGCTGGAAGAGATCCTGCGCGTCACCGGCGACGACTGA Protein sequence : MSAAAPLPYAWVRSHGVMLSEVGGEPVLLGTVDTAAWAVAELRRRHGPLPFQALDAATWQQRLAEQYRDGGDAAAVVGAA ESEVDLDRLMQDMPEVTDLLDAQDDAPVIRMINALLAQAARDGASDLHIEPFETHSVVRYRVDGTLRDMVQPRRALHAAL VSRIKIMAHLDIAEKRLPQDGRIAIRVGGRPLDIRVSTVPTGHGERAVLRLLEKDAGRLQLQRLGMADDTLATFTGLIRQ PHGIVLVTGPTGSGKTTSLYAALGQLDSSTSNILTVEDPVEYDFAGIGQIQVNARIGMSFGTALRAILRQDPDTIMIGEI RDLETAQIAVQSSLTGHGVLASLHTNDAISAVTRLADMGVEPFLLASSLRGVLAQRLVRRLCTQCRRAEVDGDGRTVWRA VGCAACANSGYRGRTGIHELFVVDDRVRTLIHEGQGEPALREAARRAGMRTLRQDGQRWVDSGVTTLEEILRVTGDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-111 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-111 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_006185120.1 | General secretion pathway protein E | VFG0182 | Protein | 7e-118 | 57 |
| gspE | YP_006185120.1 | General secretion pathway protein E | VFG2048 | Protein | 2e-110 | 50 |
| gspE | YP_006185120.1 | General secretion pathway protein E | VFG1876 | Protein | 6e-119 | 49 |
| gspE | YP_006185120.1 | General secretion pathway protein E | VFG2426 | Protein | 2e-72 | 46 |
