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Name : gspF (SMD_2407) Accession : YP_006185119.1 Strain : Stenotrophomonas maltophilia D457 Genome accession: NC_017671 Putative virulence/resistance : Virulence Product : General secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 2678636 - 2679835 bp Length : 1200 bp Strand : - Note : - DNA sequence : ATGGCGCTGTTCGACTACCAGGCCTCCAACGCGCAGGGCCGCATCGAGAAGGGCCAGCTGGACGCTGACAGCCCGCGCGG TGCGCGGCAGTTGCTGCGCGGTCGTGGGCTGACACCCGTGCAGGTCAGCGTGGCGCGCAGTGCCGGCAGTGGCTGGGCTG CCCGGCGGCTGTCTGCCAGCGAGCTGGCCTGGGCCACGCGCCAGCTGGCCAGCCTGCTGGCCGCCAGCCTGCCGTTGGAA GGCGCCTTGAGTGCGGTGATCGAGCAGGCCGAACGCCCGCACGTGGCCCAGGCGCTCACCGCAGTACGCGCCGACGTGCG TGCCGGCCAGCGCCTGACCGTGGCGCTGGCAGCGCGGCCGCGCGATTTCCCGCCGATCTATCGGGCGCTGGTGGGTGCAG GTGAGGATTCCGGCGATCTGGCACGGGTGATGGAGCGCCTGGCCGACTACATCGAAGAGCGCAATGCGCTGCAGGCCAAG GTACTGACCGCCTTCATCTACCCGGCGGCGATCAGCCTGGTATCAGTGGCGATCGTGATCTTCCTGCTCAGCTACGTGGT GCCGCAGGTGGTGACCGCGTTCGTTCAGGCACGGCAGACGCTGCCGATGCTGACCCAGGTGATGCTGGCCGCCAGCGCGT TTGTGCGCAGCTGGGGCGTGTGGGCAGGGCTGGGCATCGCTGCGCTGGTGGTGGCCTGGCGGCTGGCGTTGCGGCGGCCG GAACTGCGCCTGCGCTGGGACGCGATGCTGCTGCGGGTCCCGATGGTCGGGCGCTTCGTGCTGGGTGTGAACAGTGCGCG CTTTGCCTCGACGCTGGCGATCCTGCTGGACGCCGGTGTGCCGCTGCTGCGTGCGCTCGAAGCGGCGCGGCAGACGCTTG GCAATGCGTTGCTGGCGCGCTGTGCCGATGATGTGGCTGCTCGCGTACGCGAAGGTGCGGCACTGGGTGCTGCGTTGAAG GTACAGAAGGTCTATCCGCCGATCCTGGTGCATCTGGTGGCCAGCGGCGAGAAGACCGGTTCGCTGGCGCCACTGCTCGA ACGCGCCGCGCAGACGATCTCGCGCGAGATCGAGCGTCGCGCGATGGCGCTGACCGCACTGCTGGAACCGACCATGATCC TGGTGATGGGCGGCGTGGTGCTGACGATCGTGCTGGCCGTGCTGATGCCGATCATGGAAATGAACCAGCTGGTGCAGTGA Protein sequence : MALFDYQASNAQGRIEKGQLDADSPRGARQLLRGRGLTPVQVSVARSAGSGWAARRLSASELAWATRQLASLLAASLPLE GALSAVIEQAERPHVAQALTAVRADVRAGQRLTVALAARPRDFPPIYRALVGAGEDSGDLARVMERLADYIEERNALQAK VLTAFIYPAAISLVSVAIVIFLLSYVVPQVVTAFVQARQTLPMLTQVMLAASAFVRSWGVWAGLGIAALVVAWRLALRRP ELRLRWDAMLLRVPMVGRFVLGVNSARFASTLAILLDAGVPLLRALEAARQTLGNALLARCADDVAARVREGAALGAALK VQKVYPPILVHLVASGEKTGSLAPLLERAAQTISREIERRAMALTALLEPTMILVMGGVVLTIVLAVLMPIMEMNQLVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 8e-44 | 41 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-44 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_006185119.1 | General secretion pathway protein F | VFG0181 | Protein | 1e-55 | 45 |
| gspF | YP_006185119.1 | General secretion pathway protein F | VFG2049 | Protein | 2e-41 | 41 |
| gspF | YP_006185119.1 | General secretion pathway protein F | VFG1870 | Protein | 1e-51 | 41 |
