Gene Information

Name : SMD_2142 (SMD_2142)
Accession : YP_006184859.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Resistance
Product : Lead, cadmium, zinc and mercury transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.3
Position : 2382500 - 2384824 bp
Length : 2325 bp
Strand : -
Note : -

DNA sequence :
ATGCGTTATCGCATCGCGAACATGGACTGCCCCGCCGAGGAGGCGCTGATCCGGAACAAGCTCGGCCAAGTGCCCGGCGT
GACGGACCTGCAGTTCAACCTGGTGCAGCGCACGCTGACAGTGCTTCACCAGTTGCCTGCGCTGGCCCCCGTGGAAGACG
CGCTGGCGGCGATCGGCATGCAGGCGGTGCCATTGGAGACGACGGCGTCTGCCGTTGAAACGGCGCTGCATATCGCGAAC
ATGGATTGCCCCACCGAGGAAAGCCTCATTCGCGGCAAGTTGAGTGGCATGCCGGGGGTGGACGCGCTGGCCTTCAATCT
CGTGCAACGCACCCTGACCGTCCGCCACGCGACCGGTGTCTTGTCGGATGTGCTAGCCGCCTTGAAGTCGCTGGGCTTCG
AGGCCGAAGCGGTCGCCACGGCCGGCAGCGCAGATTCGACTGCACCGGTGCAGACCCGGACAGCCTGGTGGCCGTTGATC
GTTTCCGGCGCGGCGGCACTGCTCGCCGAGGTCATGTCGTGGCTCGGGGCCCCTGCGTGGCTGGTCATAGCACTGGCGCT
GGTGGCGATCGGTACGGGCGGCCTGTCGACCTACAAGAAGGGCTGGATTGCGCTGAAGAACCGCAATCTCAACATGAACG
CCCTGATGTCGATCGCGGTCACCGGCGCGATGCTGATCGGCCATTGGCCGGAGGCGGCCATGGTGATGGTGCTGTTCGCG
CTGGCCGAGGTGATCGAGGCCAGATCGCTGGATCGCGCGCGCAATGCGATCCGGGGCTTGATGGACCTGGCGCCCGAACG
GGCCACGGTGCTGCAGGACGGCAACCGATGGGTCGAGGCGGATGCCAAGACGGTCGCGCTCGATAGCCGGGTGCGGGTCA
AGCCGGGCGAGCGCATCGCGCTGGACGGCGTGGTGGTCCTTGGCCGCTCCACGATTAACCAGGCGCCGATCACCGGCGAG
AGCCTTCCTGTCGAAAAGGCCGAGGGCGATCTGGTGTTCGCCGGCACCGTCAACGAAGCCGGTTCGCTCGAATATCGGGT
CACGGCCACGGCCAATGATTCCACCCTCGCGCGCATCATCCACGCGGTGGAGGCGGCGCAGGGCAATCGTGCGCCCACCC
AGCGCTTCGTCGACCAGTTTGCGCGCTGGTACACCCCGCTGGTGTTTGCCGTCGCCATCGGCGTCGCGGTAGTGCCGCCC
CTGTTGATGGGCGCGGCGTGGCTGGAATGGACCTACCGGGCGCTGGTGCTGCTGGTGATCGCCTGTCCTTGCGCACTGGT
GATCTCCACCCCGGTGAGCATCGTCAGCGGACTGGCCGCGGCGGCACGGCACGGCATCCTGATCAAGGGCGGCGTGTACC
TGGAGAATGGTCGCAAGCTGCGATGGCTGGCGCTCGACAAAACCGGGACGATCACCCACGGCAAACCCAAGCAGACCGAC
TTCGTCGCATGGGGCGAGGCGGACCCAGGCCTGACTCGCGCGGTCGCGGTCAGCTTGGCCGCTCGCTCCGACCACCCCGT
CTCCAAGGCCATTGCCGTGGCGGGACAGGACGATGCGGTGACCGTGCGTGAAGTCGAGGACTTCGCCGCCTTGCCGGGCC
GCGGCGTACGCGGCCAGGTGGCAGGTGTGCTTTACCACTTGGGCAACCATCGGCTGGTGCAGGAGCTGGGTGCCAGCTCG
GCAGCGTTGGAAGCGCATTTCAGCAGCTTGGAAACACAAGGCAAGAGCGTCGTGGCGCTGGTGGCAAGCGATGGCGTGCA
GGCCCTCTTCGCCGTGGCCGACACGGTCAAGGACAGCAGCCGACAGGCCATTGCCGAACTGCACGCACTCGGCGTCAAGA
CCCTGATGCTGACTGGCGACAATCCGCACACCGCGCAGGCCATCGCCCGCGAAGTCGGCATCGACCGGGCCCAGGGCAAC
CTGCTGCCCGAAGACAAGCTGCGGGAAATGGAAGCCCTCGCCGCACAGGGCACCAGCGGCATGGTCGGCGACGGCATCAA
CGATGCCCCGGCGCTGGCGCGGGCTGATATCGGCTTTGCGATGGGCGCGGCCGGGTCCGACACCGCCATCGAAACCGCCG
ATGTGGCCTTGATGGACGACGACCTGCGCAAGATTCCCGCCTTCGTCGGGCTGTCGAAGGCCACGGCCCGGGTTTTGGCA
CAGAACATCGCTCTGGCGCTCGGCATCAAGGCGGTGTTCCTGGTGCTCACCTTAGCTGGTCAGGCTACGATGTGGGCTGC
GGTGTTTGCCGACATGGGCGCGAGCCTGCTGGTCGTCGGCAACGGCATGCGCTTGCTGCGGAAGTTATCTTCGGCCCGCA
AGTGA

Protein sequence :
MRYRIANMDCPAEEALIRNKLGQVPGVTDLQFNLVQRTLTVLHQLPALAPVEDALAAIGMQAVPLETTASAVETALHIAN
MDCPTEESLIRGKLSGMPGVDALAFNLVQRTLTVRHATGVLSDVLAALKSLGFEAEAVATAGSADSTAPVQTRTAWWPLI
VSGAAALLAEVMSWLGAPAWLVIALALVAIGTGGLSTYKKGWIALKNRNLNMNALMSIAVTGAMLIGHWPEAAMVMVLFA
LAEVIEARSLDRARNAIRGLMDLAPERATVLQDGNRWVEADAKTVALDSRVRVKPGERIALDGVVVLGRSTINQAPITGE
SLPVEKAEGDLVFAGTVNEAGSLEYRVTATANDSTLARIIHAVEAAQGNRAPTQRFVDQFARWYTPLVFAVAIGVAVVPP
LLMGAAWLEWTYRALVLLVIACPCALVISTPVSIVSGLAAAARHGILIKGGVYLENGRKLRWLALDKTGTITHGKPKQTD
FVAWGEADPGLTRAVAVSLAARSDHPVSKAIAVAGQDDAVTVREVEDFAALPGRGVRGQVAGVLYHLGNHRLVQELGASS
AALEAHFSSLETQGKSVVALVASDGVQALFAVADTVKDSSRQAIAELHALGVKTLMLTGDNPHTAQAIAREVGIDRAQGN
LLPEDKLREMEALAAQGTSGMVGDGINDAPALARADIGFAMGAAGSDTAIETADVALMDDDLRKIPAFVGLSKATARVLA
QNIALALGIKAVFLVLTLAGQATMWAAVFADMGASLLVVGNGMRLLRKLSSARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 69
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-126 47
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 3e-126 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_2142 YP_006184859.1 Lead, cadmium, zinc and mercury transporting ATPase BAC0298 Protein 0.0 75