|
Name : lysS (SMD_2013) Accession : YP_006184731.1 Strain : Stenotrophomonas maltophilia D457 Genome accession: NC_017671 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2230357 - 2231868 bp Length : 1512 bp Strand : + Note : - DNA sequence : ATGAGCGAAGCTACCGATACCCCCCCCGTCGACGAAAACAAGTTGATCGCCGAGCGCCGTGAGAAACTCAAAGCGCTGCG TGGGCAGGGCATCGCGTACCCGAACGACTTCCGTCGCGAGGACTTCGCCGGCCGCCTGCAGGAAGAATTCGCAGATGCCG AAACCTGGACCGCCGAGGCCCTGGAAGGCAACGGCCGCCAGGTGAAGATGGCGGGCCGCCTGATGGCCAAGCGCATCATG GGCAAGGCCAGCTTCGCGCAGATCCAGGACGAGTCCGGCCGCATCCAGCTGTTCCTGCAGGGCGCGGTGCTGGGCGATGC CTATACCGCCTTCAAGGGCTGGGACGTGGGCGACATCATCGCCGTCGAAGGCGGCCTGACCCGTACCAAGACCGGCGAGC TGTCGGTCAAGGCCGAATCGATCCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCGGACAAGTGGCATGGCCTGGCCGAC GTCGAGCAGCGTTACCGCCAGCGTTACGTCGACCTGATCGTGACCCCGGAGTCGCGCGCGGTGTTCATCAAGCGCTCGAA GATCATCCGCGCCATGCGCGCGTGGCTGGACAACCGCGACTTCCTGGAAGTCGAGACGCCGATGATGCATTACATCCCCG GCGGCGCGGCGGCCAAGCCGTTCACCACCCACCACAATGCGCTGGACCTGGACCTGTACCTGCGCGTGGCGCCGGAGCTG TACCTCAAGCGCCTGACCGTGGGTGGCCTTGAGCGCGTGTACGAGATCAACCGCAACTTCCGCAATGAAGGCGTCAGCAC CCGCCACAACCCGGAATTCACCATGATGGAGCTGTACGAGGCCTATGCCACGTACAACGAGATCATGGACCTGACCGAAG GCGTGATCCGTGACGTGGCCAAGGCCGTCAACGGTGGCACCGAGGTCGAATGGGACGGCGCGAAGATCGACCTGGGCCCG GCATTCCGCCGCTGGCGCATGGACGAGGCGGTGCGCCACCACAATCCGGAAATCTCTGCGGCGGACTGCACCGACCGCGA CGCGCTGCTGCGCCATTGCGAGCGCCTGAAGATCCGCGTCAAGCCGTCCTACGGCTGGGGCAAGCTGCTGCTGGAGATCT TCGAGGCCACCGTCGAGCACACCCTGATCCAGCCGACCTTCATCACCGACCATCCGGTGGAGGTCTCGCCGCTGGCCCGT GCCAACGACAATGACCCGGGCTACACCGACCGCTTCGAGCTGTTCGTCAACGGCAAGGAGCTGGCCAACGGCTTCTCCGA GCTGAACGATCCGGAAGACCAGGCCCAGCGCTTCCAGGCCCAGGTGGCGGCGAAGGAAGGTGGCGATGACGAGGCCATGC ACTACGACGCCGACTACATCCGTGCGCTGGAGTACGGCATGGCACCGACCGGCGGCCTCGGCATCGGCGTGGATCGCCTG GTGATGCTGCTGACCGGCAGCAGCTCGATCCGCGATGTACTGCTGTTCCCGTACATGCGTCCGGAGCAGTAA Protein sequence : MSEATDTPPVDENKLIAERREKLKALRGQGIAYPNDFRREDFAGRLQEEFADAETWTAEALEGNGRQVKMAGRLMAKRIM GKASFAQIQDESGRIQLFLQGAVLGDAYTAFKGWDVGDIIAVEGGLTRTKTGELSVKAESIRLLTKSLRPLPDKWHGLAD VEQRYRQRYVDLIVTPESRAVFIKRSKIIRAMRAWLDNRDFLEVETPMMHYIPGGAAAKPFTTHHNALDLDLYLRVAPEL YLKRLTVGGLERVYEINRNFRNEGVSTRHNPEFTMMELYEAYATYNEIMDLTEGVIRDVAKAVNGGTEVEWDGAKIDLGP AFRRWRMDEAVRHHNPEISAADCTDRDALLRHCERLKIRVKPSYGWGKLLLEIFEATVEHTLIQPTFITDHPVEVSPLAR ANDNDPGYTDRFELFVNGKELANGFSELNDPEDQAQRFQAQVAAKEGGDDEAMHYDADYIRALEYGMAPTGGLGIGVDRL VMLLTGSSSIRDVLLFPYMRPEQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-131 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-80 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006184731.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-131 | 55 |
