Gene Information

Name : SMD_1739 (SMD_1739)
Accession : YP_006184460.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system ATP-binding protein LolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1913242 - 1913955 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAGGTCTTCAACCGCGGCGATGAGGTGATCCGCGCCGAAGCACTGGGCAAGACCTACGCCGAAGGGCGCATGCA
GACCCCGGTGTTCGATGGACTGGACCTGACCGTGACCGCCGGCGAAACCGTGGCGATCATCGGTGCCTCCGGTGCCGGCA
AGAGCACGCTGCTGCACCTGCTGGGCGGGTTGGATATTCCGACCGCAGGCGAGGTCTACGTGACCGGCCAGCGCATGTCC
GCGCTGTCGGACACCGCGCGTGGCCTGCTGCGCAACCAGGCGTTGGGCTTCGTCTACCAGTTCCACCACCTGTTGCCTGA
GTTCACCGCGCTGGAAAACGTGATGATGCCGGTGCTGCTGGCCGGCACTGCCGTGGCCGAAGCGAGCAGCCGGGCCACCA
CGCTGCTGGAAGCGGTCGGCCTCGGACATCGCCTGGACCACAAGCCGGGCGAGCTGTCCGGTGGTGAGCGCCAGCGTGCC
GCAGTGGCCCGTGCGCTGGTCAATCATCCGGCCTGCGTGCTCGGTGACGAGCCGACCGGCAACCTGGATGACCGCACCGC
GGGCACCGTGTTCGAGCTGATGCTGGAACTCAACCGCGCGCGTCATACCAGCCTGGTGCTGGTTACCCACGACCGCAGCC
TGGCGAGGCGCCTGGACCGGGTGCTGGAGCTGCGCGAAGGTCGCCTGCACGCGCTGGCCCACGCCGACGTCTGA

Protein sequence : 
MNKVFNRGDEVIRAEALGKTYAEGRMQTPVFDGLDLTVTAGETVAIIGASGAGKSTLLHLLGGLDIPTAGEVYVTGQRMS
ALSDTARGLLRNQALGFVYQFHHLLPEFTALENVMMPVLLAGTAVAEASSRATTLLEAVGLGHRLDHKPGELSGGERQRA
AVARALVNHPACVLGDEPTGNLDDRTAGTVFELMLELNRARHTSLVLVTHDRSLARRLDRVLELREGRLHALAHADV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SMD_1739 YP_006184460.1 lipoprotein releasing system ATP-binding protein LolD NC_008702.1.4606598. Protein 1e-30 45
SMD_1739 YP_006184460.1 lipoprotein releasing system ATP-binding protein LolD NC_012469.1.7686878. Protein 1e-37 42