|
Name : SMD_1541 (SMD_1541) Accession : YP_006184273.1 Strain : Stenotrophomonas maltophilia D457 Genome accession: NC_017671 Putative virulence/resistance : Unknown Product : superfamily II DNA/RNA helicases, SNF2 family Function : - COG functional category : - COG ID : - EC number : - Position : 1707906 - 1710182 bp Length : 2277 bp Strand : - Note : - DNA sequence : ATGTCCCTCGATCTCGAAACCACTGCCGCTGAATCCGCGCCCGTACAGGGCGAACTGCTCGACGCGGAATCTTCCCCTCT GACCCTGAGCCTTCAGGATTTTGTCGGCGAGTTCGGCGACGAACTACTCGACGCCCTCAACAGCGCTAATCCGCCGGTCT ATACCGGCCAACCGCAGGCGCACCGGCAACTGGTGGTCGCCAGCCTCAAGCGCAAGCTGTTCCCAGCCCAGGCCGAAGTC GTCCACGCCGCCGCCGAGCTGCTGATCGACCGTGGCGAACGTGCTGCGATCGTCAATGGCGAGATGGGCTGCGGCAAGAC GACCGTCGGCATTGCGGCCGCCGTGCTCAACGCCGAAGGCTATCGCCGCACTCTGGTGCTGTCGCCGCCCCACCTGGTTT ACAAGTGGCGGCGCGAGATCCAGGAGACGGTGGCCGGTGCCAAGGTGTGGGTACTCAACGGGCCGGATACGCTCGTCAAG CTCATCAAGCTGCGCGAGCAGTTGGGCGTGCAGCCCACGGGCCAGGAGTTCTTCGTCCTGGGGCGCGTCAGGATGCGGAT GGGCTTTCACTGGAAGCCTGTCTTCACCACGCGGCGCACCCGCCACGGCGACGTGGCGGCCTGCCCGGACTGCGGCACGG TCATCACCGACCTCGACGGCGAGCCGGTCAACCCGATCGCGCTCCAAGCCGAGGAGTGCCGCAGGAAGTGCGGCCACTGC GCCGCGCCCCTGTGGACACTGATCCGCCCGCGCAGTCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTCAAAGCCTTAAA GCGCATACCGACCATCGGAGAGGTCACCGCGCAGAAGCTGATGCAAAAGTTCGGTGACGGGTTCCTGGCGTCGATGCTCG GCGACAACATCCATGAGTTCATCAACCTCATGGATGGCAACGGCGAGCTGGTGTTTTCCGACCGTCAGGCCACGCGCATG GAACGTGCGATGGCCAACATGGAGTTCGGCTTTGGCGAGGGCGGCTATCAGCCGTCCGAGTTCATCAAACGCTACCTGCC GCAAGGCACGTTCGACCTGCTCATCGCCGATGAGGCACATGAGTACAAGAACGGGGGCAGTGCCCAGGGCCAGGCCATGG GCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGTTGATGGGCGGCTACGGGGACGACCTGTTCCAC CTGCTGTTCCGAGCCCTTCCGGGGCGGATGATCGAAGACGGCTACCGCCCGACCACGAGCGGCAGCATGACCTCGGCTGC GATGGCGTTCATGCGCGATCACGGGGTGTTGAAGGACATCTACTCCGAGAGCACCGGCACGGCGCACAAGACGGCCAAGG GCACCAAGGTATCGGTGCGCATGGTCAAGGCCCCGGGGTTTGGCCCCAAGGGCGTGCTGCGCTGCATCCTGCCGTTCACG ATCTTTCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCGATGGACAC GGCGCAAGCCGCGGCCTACCGCGATCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATACGA CCTTGCTGGGTGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACCGTGGTGCATCCGCGC ACGCGCAACACCTTGGCGTTTGTCCCGGCTCAGTTCAACGAGTTCGAGATCAGCCCCAAGGAGCGTGAGCTGATCGACAT CTGCAAAGAGGAGAAGGCGCAGGGCCGCAAGGTCCTGGCCTACACGGTCTATACCGGCACGCGCGACACCACGTCGCGCC TGAAGGTGTTGCTGGAGCAGGAAGGCTTCAAGGTGGCGGTGCTGCGCGCGAGCGTGGATGCCAGCCGCCGCGAAGACTGG ATCGCCGAGCAACTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAGTTGGTCAAGACGGGGCTGGACCTGTTGGA GTTCCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCATCG GGCAGAAGCAGCCCGTGCGTGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAGCTGATGGCCAAG AAGATCATGGTCTCGCAGTCCACCTCGGGCGACGTGCCCGAATCCGGGCTCGATGTCCTGAACCAGGACGGTGATTCCGT CGAGGTCGCACTGGCCCGGCAGCTTGTCGCCGCATGA Protein sequence : MSLDLETTAAESAPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYTGQPQAHRQLVVASLKRKLFPAQAEV VHAAAELLIDRGERAAIVNGEMGCGKTTVGIAAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVK LIKLREQLGVQPTGQEFFVLGRVRMRMGFHWKPVFTTRRTRHGDVAACPDCGTVITDLDGEPVNPIALQAEECRRKCGHC AAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQATRM ERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFH LLFRALPGRMIEDGYRPTTSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGTKVSVRMVKAPGFGPKGVLRCILPFT IFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHPR TRNTLAFVPAQFNEFEISPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRREDW IAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMAK KIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 99 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 88 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 72 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 72 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 70 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 8e-175 | 50 |
