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Name : SMD_1516 (SMD_1516) Accession : YP_006184248.1 Strain : Stenotrophomonas maltophilia D457 Genome accession: NC_017671 Putative virulence/resistance : Unknown Product : type IV secretory pathway, VirB4 components Function : - COG functional category : - COG ID : - EC number : - Position : 1686508 - 1689399 bp Length : 2892 bp Strand : - Note : - DNA sequence : ATGCGGTGGAAACTTCCATGGCCGAAGCTGGCTGCCGTCAGCGCCGAAGACACCGCCGCCGACGAGCAGCCGGACGGCTG GCAGCGCCACGTCGAGGCCTTGCAGCAAGCCGGCATCCCCGAACCCGGCGCCGCGGTCCAGGGCCGCAAGCCGGCGACCG TGGCCGACGAGCAGGCGCTGTACGACGTCGCACCGTCCTTCGTGGAACTGCTGCCCTGGGTGGAGTTCTTGCCCGAGTCG AAATCGATGCTCCTGGAGGACGGCCAATCGGTGGCCGCCTTCTACGAGCTGGTGCCGCTGGGCACCGAAGGCCGGGAACC CGGCTGGCTCGCGCATGCCCGCGACGCCCTGGAAAACGCGCTTCAGGACAGCTTCGATGAACTGGACGAGAACCCGTGGG TGCTCCAGCTCTATGCCCAGGACGAACCGAGCTTCGACCAGTACATGCAGACCTTGCGCGATTACGTGCAGCCACGTGCG CGCGGCTCGGCGTTCACCGAGTTCTACCTGCGCTTCTTCGGCCACCACCTGCGCGCTGTGGCCAAGCCCGGCGGCCTGTT CGAGGACACGGTGGTCACGCGGCTGCGCTGGCGCGGCCAGACGCGGCGCGTGCGCATGGTGGTGTACCGCCGCGCGAGCG GACAGGGACAGGCAAACCGCCGCGGCCAGACACCCGAGCAGATGCTGGGCATCGTCTGCGACCGCCTGTGCGGCGGCCTG GCGAACGCCGGCATCCAGGCCCGGCGCATGGTCGCGGCCGACGTCCACGACTGGCTGCTGCGGTGGTTCAACCCGCGCCC CACGCTGCTCGGGCCTGGGGTGGAGGACCGGGAGCGCTTCTACGCGTTGGCGCGCTATCCGGACAGTACCGAGGAAAGCG AGGCCGGCGAGATCGAGCTGGCGAGCGGGCGGGATTTCAGCCAGCGGCTGTTCTTTGGGCAGCCGCGCTCGGACGTGGCG CAAGGGGCCTGGTACTTCGACGGCATGCCGCACCGCGTGCTGATCACCGACCGGCTGCGCATGCCGCCCGGCACCGGGCA CCTGACCGGCGAGACCCGCAAGGGGGACGCGATCAACACGCTGTTCGACCAGATGCCCGAGGACACCTTGATGTGTCTCA CCATGGTGGCCACGCCGCAGGACGTCCTCGAATCGGACCTCAACCATCTGGCGAAGAAAGCTGTGGGCGAGACGCTGGCG TCGGAGCAGACGCTCAAGGACGTGCATGAAGCCCGCTCCCTGATCGGCAGCGCGCACAAGCTCTACCGGGGCACTCTGGC GTTCTACCTACGCGGGCGCGACGAGGCGGAACTGGATCGGCGCGGCCTGGACCTCGCGAACGTGATGCTCAACGCCGGCC TGCAGCCGGTGCGCGAGGACGACGAGGTGGCGCCGCTCAACAGCTACCTGCGCTGGCTGCCGTGCTGCTACAACCCCGGC AAGGACCGGCGCCGGTGGTACACGCAACTGATGTTCGCCCAGCACGCGGCGAACCTGTCGCCAGTATGGGGCCGCGCCCA GGGCACGGGGCATCCCGGCATCACGATGTTCAATCGCGGCGGCGGCCCGATTACGTTCGACCCCTTGAACAGGTTGGATC GGCAGATGAATGCCCATCTGTTTCTATTTGGCCCCACCGGCTCGGGGAAGTCCGCCACGCTCAACAACCTGCTGAACCAG GTGACGGCCATCTACCGGCCGCGGCTTTTCATCGTGGAAGCCGGCAACAGCTTCGGCCTGTTCAGCGACTTCGCCAGGCG CCTGGGCCTGACCGTGAACCGGGTCAAGCTGGCCCCCGGATCGGGCATCAGCCTGGCGCCGTTCGCCGACGCACGCCGGC TGATCGAAACGCCCAGCGACGTACAGACGCTCGATGCCGACGCGCTGGACGAAGACCTGCCCCCCGATGCCTCGGCCATG GAAGCGGACGAGCAGCGCGACGTGCTGGGCGAACTGGAGATCACAGCGCGGCTGATGATCACGGGCGGCGAAGACAAGGA AGAAGCGCGGATGACGCGGGCCGACCGCTCGCTGATCCGCCAGTGCATCCTCGACGCCGCCGAACATTGCGTGGCCGAAA AGCGCACCGTGCTCACGCGCGACGTGCGCAACGCGCTGCGCGCCCGTGGCCAGGACCCGACGCTGCCCGAGATGCGGCGC GTGCGGCTGCTGGAGATGGCGGACGCGATGGACATGTTCTGCCAAGGCACGGACGGCGAGATGTTCGACCGTGACGGCAC GCCGTGGCCCGAGGCCGACATCACGCTGGTCGATCTGGCGACCTATGCCCGCGAGGGCTACAACGCGCAGCTCTCCATCG CCTACATCAGCCTGATCAGCACGGTGAACAACATCGCCGAGCGCGACCAGTACCTGGGCCGGCCGATCGTCAACGTGACC GACGAAGGTCACATCATCACCAAGAACCCGCTGCTCGCGCCCTATGTCGTGAAAATTACAAAAATGTGGCGCAAGTTGGG CGCCTGGTTCTGGCTGGCGACGCAAAACATCGACGATCTGCCGCGCGCCGCAGAGCCCATGCTCAACATGATCGAGTGGT GGGTGTGCCTGTCGATGCCGCCGGACGAAGTGGAGAAGATCGCCAGGTTCCGCGAACTCTCGCCGGCGCAGAAGGCGCTG ATGCTCTCCGCACGCAAGGAAGCGGGCAAGTTCACCGAGGGCGTCATCCTCTCCAAGAGCATGGAAGTGCTGTTCCGCGC CGTGCCGCCAAGTCTCTACCTCGCGCTCGCGCAAACCGAGCCCGAGGAGAAGGCAGAACGCTACCAGCTCATGCAGCAGC ACGGCGTCAGCGAGCTGGATGCCGCCTTCAAGGTGGCTGAGAAGATCGACCGGGCACGTGGCATCGAGTCGCCGACCCTG GACCTGCCCTGA Protein sequence : MRWKLPWPKLAAVSAEDTAADEQPDGWQRHVEALQQAGIPEPGAAVQGRKPATVADEQALYDVAPSFVELLPWVEFLPES KSMLLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRA RGSAFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVVYRRASGQGQANRRGQTPEQMLGIVCDRLCGGL ANAGIQARRMVAADVHDWLLRWFNPRPTLLGPGVEDRERFYALARYPDSTEESEAGEIELASGRDFSQRLFFGQPRSDVA QGAWYFDGMPHRVLITDRLRMPPGTGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLESDLNHLAKKAVGETLA SEQTLKDVHEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPG KDRRRWYTQLMFAQHAANLSPVWGRAQGTGHPGITMFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQ VTAIYRPRLFIVEAGNSFGLFSDFARRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDASAM EADEQRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRARGQDPTLPEMRR VRLLEMADAMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIVNVT DEGHIITKNPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWVCLSMPPDEVEKIARFRELSPAQKAL MLSARKEAGKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQHGVSELDAAFKVAEKIDRARGIESPTL DLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 99 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 80 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 67 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 63 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 62 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 62 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 53 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 53 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 52 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 51 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 49 |
