Gene Information

Name : SMD_1505 (SMD_1505)
Accession : YP_006184237.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Unknown
Product : pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide acyltransferase (E2) component, and related enzymes
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1676298 - 1678220 bp
Length : 1923 bp
Strand : -
Note : -

DNA sequence :
ATGGGGTGCAAGGGGAAAGGCCCTACCTCGAAAAGGCGAAAAGGCCTCCCGGCCGGCCCCCCAGAGGACACCCGCATGCT
CTCCCTGTTCCAGCGAAAACGGCCCCCGGTCGCTGCCCCGTCGCCAGCGCCCGCCACCGACCTCCCGAAAGGGTTGCTGC
GGCCCGAATCGGCCGCATCGCTGCTGGCAACACCGCGCCGGCAGAAGCTGCTGGAACACATCTGGCAGCGCACGTCGCTG
TCGCGGCGGCAGTTCGCCACCCTATACCGCACGCCGCTGGAGCACTACGCCGAGTTGGTCCAACAATTCCCCGCATCGGA
AAGCCATCACCACGCTTACCCCGGCGGCATGCTGGATCACGGGTTGGAGATCGTCGCCTATGCGCTCAAGCTGCGGCAGT
CCCATCTGCTGCCCATTGGCGGCAGTCCCGAAGACCAGGCGGCGCAGTCTGAAGCCTGGACTGCCGCAGTCGCTTATGCC
GCGCTGCTGCACGACATCGGCAAGATCGCCGTCGATCTGCACGTCGAACTGTCCGACGGCTCGCTGTGGCACCCCTGGCA
CGGCCCGCTGCACCAGCCATACCGCTTCCGCTACCGCGACGATCGGGAATATCGGCTCCACAGCGCCGCGACAGGTTTAC
TCTACCGTCAACTGCTCGACCGTGATGCCCTGGACTGGCTCAGTGGCTATCCCGACCTGTGGGGACCGCTGCTCTACGTC
CTGGCCGGCCAGTACGAGCGCGCCGGCGTGCTGGGCGAACTTGTCGTGCAGGCCGACCGGGCTTCGGTGGCCCAGGAACT
GGGCGGCGATCCGGCCCGCGCCATGGCTGCACACAAGCATGCGCTGCAGCGCAAGTTGCTCGACGGGCTGCGCTACCTGC
TCAAGGAACAGTTGAAGCTGAACCAGCCGGAAGCCTCCGATGGCTGGATCACCGAGGATGCCTTGTGGCTGGTAAGCAAG
ACGGTCTCGGACAAGCTGCGTGCGCACCTGCTGTCACTAGGCGTCGACGGCATCCCCGCGAGCAACACCGCCGTCTTCAA
CGTGCTGCAGGATCACGGCATGTTGCAACCGACGCCGGACGGCAAGGCGGTCTGGCGCGCGACCGTGACCAGCACGACTG
GCTGGTCCCACTCATTCACCCTGCTGCGTCTCGCTCCCGCGCTGATTTGGGAGTCTGGAGAGCGGCCAGCGCCCTTCGCA
GGGGCAGTGGCAATCGACGGGACACCGGCACCCAACAATGCCGATGCCTTGGTGCCCTCGCCGGCAATGACGGCAAAGCC
AGCCACCGACGATCAAGAGTCCCTTCCATGGGAGGGCGTCGACGCCGCGACTCCGGTTCACTTGCCTGCCGCACAAGCCG
CACCCGATGTCATGGAGGACCTGCTGGCGATGGTAGGAATCGGCGATTTGCTTGTTCCCCAACAGGATGCGGAAGCCGTC
TCGGGCGACGCACCCGCCGCTGGCCCTCAAACGCCACCGCCAACCTCGATGGTGCCCGTGCCGTCATCAGCGCCGGTGCC
CACGTCCTCGTCGGCGCAGCCATCGGGCGAGCACTTCATGGCGTGGCTGAAACAAGGTATCGCTACCCGCCGGCTGGTCA
TCAACGACGCGAAGGCGCTCGTGCATACGGTGGGCGACACGGCCTACCTGGTCAGCCCCGGGGTATTCCAACGCTACGCA
CAAGAACACCCCCAGGTCGGGACTCTCGCCAAGCAGGAGAACCAGCAGGATTGGCAATGGGTACAAAAGCGCTTCGAGCG
CCTGCAACTGCATCGCAAAAAGCCCAGGGGCCTGAACATCTGGACGTGCGATGTCACAGGCCCCAGGAAGTCCCGCCGCC
TGTATGGCTATCTATTGCACGATGTTCGGCTCCTGTTCGCAGAGCCACCACCGAACAATCCTTACTTGTCACTTCTCGCG
TAA

Protein sequence :
MGCKGKGPTSKRRKGLPAGPPEDTRMLSLFQRKRPPVAAPSPAPATDLPKGLLRPESAASLLATPRRQKLLEHIWQRTSL
SRRQFATLYRTPLEHYAELVQQFPASESHHHAYPGGMLDHGLEIVAYALKLRQSHLLPIGGSPEDQAAQSEAWTAAVAYA
ALLHDIGKIAVDLHVELSDGSLWHPWHGPLHQPYRFRYRDDREYRLHSAATGLLYRQLLDRDALDWLSGYPDLWGPLLYV
LAGQYERAGVLGELVVQADRASVAQELGGDPARAMAAHKHALQRKLLDGLRYLLKEQLKLNQPEASDGWITEDALWLVSK
TVSDKLRAHLLSLGVDGIPASNTAVFNVLQDHGMLQPTPDGKAVWRATVTSTTGWSHSFTLLRLAPALIWESGERPAPFA
GAVAIDGTPAPNNADALVPSPAMTAKPATDDQESLPWEGVDAATPVHLPAAQAAPDVMEDLLAMVGIGDLLVPQQDAEAV
SGDAPAAGPQTPPPTSMVPVPSSAPVPTSSSAQPSGEHFMAWLKQGIATRRLVINDAKALVHTVGDTAYLVSPGVFQRYA
QEHPQVGTLAKQENQQDWQWVQKRFERLQLHRKKPRGLNIWTCDVTGPRKSRRLYGYLLHDVRLLFAEPPPNNPYLSLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 79
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 7e-180 68
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 4e-140 52
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-140 52
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 3e-141 51