Gene Information

Name : aldH (SMD_1402)
Accession : YP_006184140.1
Strain : Stenotrophomonas maltophilia D457
Genome accession: NC_017671
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 1570546 - 1572042 bp
Length : 1497 bp
Strand : +
Note : -

DNA sequence :
ATGGCCGACTTTCCCGACCACAGCCACTGGCAGGCGCTGGCCCAGCAGCTTTCGATACCCGGACAGGCCTTTATCGAGGG
TCGTTACACCGACGCTGCCAGCGGCGCGCGCTTCGACTGCATCAGCCCGATTGATGGTCGCGTGCTGGGGGTGGTCGCCG
ACTGCGATGCACAGGACGTGGAGCGCGCAGTGGGCGCGGCGCGGCGTGCCTTCGATGCGGGCCACTGGTCACAGGCCAGC
CCGGCCCATCGCAAGCGCGTGCTGCTGGCGTTGGCGGCGTTGGTGGAAAAACACGCGGACGAGCTGGCCCTGCTGGAAAC
CCTGGACATGGGCAAGCCGGTGCGTGATGCGCGTCGTATCGACCTGCCCGGCGCGGTGCGCTGCCTGCGCTGGACGGCCG
AAGCGGTGGACAAGCTGTACGGTGAGGTCGCGCCCACCGGCCCGCATGAGCTGGGCCTGGTCACGCGCGAGCCCGCCGGC
GTGGTGGCGGCGATCGTGCCGTGGAATTTCCCGTTGCTGATGGCGTGCTGGAAGATCGCGCCTGCATTGGCCATGGGCAA
CTCGGTGGTGCTCAAGCCTTCCGAGCGCTCGCCCCTGAGTGCGTTGCGGCTGGCGGCGCTGGCCGCCGAAGCGGGCCTGC
CGGAGGGCGTGCTGAACGTGCTGCCGGGCCACGGTGCGCGCGTCGGTGAGCCGTTGGCCCTGCACATGGATGTGGACGTG
CTGGCGTTCACCGGCTCCACGGCCACCGGCGCGCGGCTGCTGCAGTATTCAGGGCGGTCCAACCTCAAGCGGGTCTGGCT
GGAGTGTGGTGGCAAGAGCCCGCACGTGGTGTTTGCCGATGCCCCCGATCTGGATGCCGCTGCGAAGGCGGTGGCACGGG
GCATCTTCTTCAACCAGGGCGAGGTCTGTACTGCCGGGTCACGGCTGCTGGTGCAGCGCTCGATCCGCGAGGATTTCGTG
CACCAGGTGGTTGCCTACGGCCAGCACATGCAGCCGCGCCACCCGCTTGACGCCGACGCACCGATGGGCGCGCTGGTGGA
TGCCGCGCATCTGGACAAGGTGATGGGGGATATCGTGCGTGCCGAAAGCGAGGGCGCCCGCCTGCTGCTGGGCGGTCATC
GCGCCGATGTCGAGGCGGGCGGTTGTTATGTGCAGCCCACGGTGTTCGATCAGGTGAGCCCCGACCAGGCATTGGCGCGC
GAGGAAGTATTCGGGCCGGTGCTGGCGGTGCTCGGCTTTGACGACGAAGCCGAAGCGGTGCGCCTGGCCAATGACAGCCG
CTACGGCCTCGCCGCCGGCCTGTGGACGCGCGATCTTGCCCGCGCCCATCGCGTCGCACGCCAGCTGCGCGCCGGCAGCG
TCTGGGTGAACGGCTGGGATGGCGGTGACATGACCGCCCCGTTCGGTGGCTACAAGCAGTCCGGCAATGGGCGCGACAAA
TCGCTGCATGCGTTCGACAAGTACAGCGAGATCAAGGCCACCTGGATCCAGCTGTAA

Protein sequence :
MADFPDHSHWQALAQQLSIPGQAFIEGRYTDAASGARFDCISPIDGRVLGVVADCDAQDVERAVGAARRAFDAGHWSQAS
PAHRKRVLLALAALVEKHADELALLETLDMGKPVRDARRIDLPGAVRCLRWTAEAVDKLYGEVAPTGPHELGLVTREPAG
VVAAIVPWNFPLLMACWKIAPALAMGNSVVLKPSERSPLSALRLAALAAEAGLPEGVLNVLPGHGARVGEPLALHMDVDV
LAFTGSTATGARLLQYSGRSNLKRVWLECGGKSPHVVFADAPDLDAAAKAVARGIFFNQGEVCTAGSRLLVQRSIREDFV
HQVVAYGQHMQPRHPLDADAPMGALVDAAHLDKVMGDIVRAESEGARLLLGGHRADVEAGGCYVQPTVFDQVSPDQALAR
EEVFGPVLAVLGFDDEAEAVRLANDSRYGLAAGLWTRDLARAHRVARQLRAGSVWVNGWDGGDMTAPFGGYKQSGNGRDK
SLHAFDKYSEIKATWIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-105 56
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-60 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-61 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-61 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-61 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldH YP_006184140.1 aldehyde dehydrogenase VFG0082 Protein 1e-60 41