Gene Information

Name : ssb (HBHAL_5143)
Accession : YP_006182749.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4121218 - 4121721 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAAATCGTGTCGTATTAGTCGGCAGATTGACGAAGGATCCTGATTTACGCTATACGCCAAACGGAGTGGCCGTCGC
CAACTTCACCATTGCGGTGAACCGACCATTTTCTAATAATCAAGGTGGTCAGGACGCAGATTTTCTTAACTGCGTGGTCT
GGAGACGTGCTGCAGAAAACTTAGCCAACTTTATGAATAAAGGCAGTCTTGTAGGAGTGGATGGACGATTACAGTCCAGA
AGCTTTGATAACCAGGAAGGCAAGCGTGTATTTGTAACAGAAGTAGTTGCAGATAGCGTACAATTCTTAGAATCCAAAGG
AAGTTCTTCCCAGGGTGGAAGTAATCGTGGAGGCTCAGGATACCAGGCAAATCAGAATCAACAACCATCCGGAAATAATT
TCGGATCGAACAACAACAATAATAACAACAATCAACGAGATGAGGATCCATTCGCAGATAATGGAGAGCCCATCGATATA
TCAGATGATGATTTACCATTCTAA

Protein sequence : 
MLNRVVLVGRLTKDPDLRYTPNGVAVANFTIAVNRPFSNNQGGQDADFLNCVVWRRAAENLANFMNKGSLVGVDGRLQSR
SFDNQEGKRVFVTEVVADSVQFLESKGSSSQGGSNRGGSGYQANQNQQPSGNNFGSNNNNNNNNQRDEDPFADNGEPIDI
SDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-33 50
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 7e-33 50
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-31 50
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-32 50
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-33 50
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 2e-32 49