Gene Information

Name : HBHAL_4345 (HBHAL_4345)
Accession : YP_006181960.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Virulence
Product : PTS system subunit IIC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3283385 - 3284752 bp
Length : 1368 bp
Strand : +
Note : -

DNA sequence :
ATGATTGATTTAATAATGAAGGACATCTTAGGTACTCCAGCCATCCTGGTCGGTCTATTCGCCTTAATCGGACTCCTTGT
GCAACGTAAAAACTCCGGAGACGTCGTTTCCGGAACCCTTAAAACGGTGATGGGCTTTGTGATCCTTGGGGCCGGGGCGA
ATGTCCTCGTCCAGTCCCTTGGACAATTCAGCAGTATGTTCGACAAAGCCTTCGCTGTGGACGGAGTCATCCCGAACAAT
GAAGCGATTGTTGCGCTTGCCCAGGAAAGCTTCGGTACAGAGACCGCAATGATTATGTTGTTCGGTATGATTGTTAATAT
CCTGCTTGCCAGGTTCAGCCCTTTTAAATATATCTTCTTGACCGGACACCATACCATGTTTATGGCCTGCTTAATCGCTG
TTATCTTAAATACCGGCGGGTTTTCCGGCGCCACTCTTATTATCTTCGGTTCCGTGATTCTCGGAACATTAATGGTACTT
TCACCGGCCATGCTTCAGCCTTTCACACGAAAAATTACCGGTTCCGATGACTTTGCAGTCGGCCACTTTGGTTCCATTGG
TTATTTAGTGTCCTCTCTAGTCGGTAAGGCTGTCGGAAAAGGATCAAAATCAACGGAAGATATCAAAGTACCAAAATCTC
TTGGTTTTCTAAGAGACACATCCGTTTCCGTATCCTTAACCATGGTTATCCTGTTCTTTGTCGTCGCAGGTGCAGCCGGC
CCAGCTTTCGTTGAAACCGAATTAAGCGGCGGACAGAACTTCATGGTCTTCGCATTTATGCAGGGTCTTACCTTTGCTGC
CGGCGTATATATCATCTTAGCTGGTGTGCGTATGCTTCTTGGAGAAATTGTCCCAGCCTTTAAAGGGATCGCTGATAAAA
TTGTGCCGAATGCGAAACCGGCACTTGATGCCCCGGCTATCTTCCCATTTGCCGGAAACGCTGTCATCATCGGTTTCCTA
TTCAGCTTCGCTGCCGGACTTGTAAGCATGCTCTTCTTACCTTTATTAGGATTAAAAGTAATTGTACCAGGGCTTGTCCC
TCACTTCTTCACAGGTGCTGCTGCCGGAGTCTTCGGTAACGCCACCGGTGGACGTAAAGGAGCCATCTTCGGCTCAATGG
CGAACGGTGTTATGATCAGTTTCCTTCCAGCCCTATTGCTTCCGGTACTCGGCTCCCTAGGATTTCAGGGAACGACGTTC
GGAGATGCAGACTTTGGTCTAGTAGGAATTGTACTTGGTAATCTGATCAACCTTGTTCAGTCAAAAGCAATCGTGATGGT
ATTGGTTCTTGCTCTAATAGCTATCCTGTTCTTCATCGGAATGAAATCAAAACCCAATAAAGATGATGGAGATACCGACG
CAGCCTAA

Protein sequence :
MIDLIMKDILGTPAILVGLFALIGLLVQRKNSGDVVSGTLKTVMGFVILGAGANVLVQSLGQFSSMFDKAFAVDGVIPNN
EAIVALAQESFGTETAMIMLFGMIVNILLARFSPFKYIFLTGHHTMFMACLIAVILNTGGFSGATLIIFGSVILGTLMVL
SPAMLQPFTRKITGSDDFAVGHFGSIGYLVSSLVGKAVGKGSKSTEDIKVPKSLGFLRDTSVSVSLTMVILFFVVAGAAG
PAFVETELSGGQNFMVFAFMQGLTFAAGVYIILAGVRMLLGEIVPAFKGIADKIVPNAKPALDAPAIFPFAGNAVIIGFL
FSFAAGLVSMLFLPLLGLKVIVPGLVPHFFTGAAAGVFGNATGGRKGAIFGSMANGVMISFLPALLLPVLGSLGFQGTTF
GDADFGLVGIVLGNLINLVQSKAIVMVLVLALIAILFFIGMKSKPNKDDGDTDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 1e-106 60
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 9e-107 60
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 9e-107 60