Gene Information

Name : HBHAL_4061 (HBHAL_4061)
Accession : YP_006181676.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Virulence
Product : iron-III-dicitrate ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3015404 - 3016243 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence : 
ATGGATACACTGTTGGCTAACAACCTGACCTTGGGTTATGGGGATTCCGTCGTTATAGATTCTTTGAATATCAGCATTCC
GAAAGGGAAGGTCACCGTACTAATTGGAGGCAATGGGTGTGGTAAATCCACGTTATTGCGTTCAATGGCACGCCTGCTGA
AACCGAAATCAGGAGAAGTTGTACTCGATAGTGAAGATATTTCTAAAATGCGGACAAAAGAAGTTGCAAAGAAAATGGCA
ATCCTGCCTCAAAGCCCTACTACTCCAGAAGGTCTAAGTGTTTATCAATTAGTTAAGCAAGGGCGTTACCCTTATCAAGG
TTTTGCTAAGCGCTGGTCTGAAGATGATGAGTATGCGGTTAACAAAGCACTAGAAGATACGAACCTAATGGAATTAAAAG
AGCGAACGGTTGACTCTTTATCCGGAGGACAGCGCCAGCGGGCCTGGATTGCAATGACTCTTGCTCAGAATACCGATACC
CTTTTACTCGACGAGCCAACCACTTATCTTGATATGACTCATCAGATTGATATATTGGATTTGCTGTTTGACTTAAATCA
GGACAATGGGAGAACAGTGGTAATGGTCCTTCACGATATCAATCTAGCCTGCCGCTATGCTGATCATATTATCGCTGTTA
AAGATCAGACGGTATATGCTCAAGGGAAACCAGAAGAAGTCATTACCTGCGATTTAATGCAGCATGTATTTGAAATGAAT
TGTGATGTCAGACAAGATCCTCTTTTTGGGACACCAATGTGTATCCCGCATGGAAAAGGCCGCTGCTTAATTAAGCAAGC
CCAGGCGGAAGCGCAAACGTCCCAGACATCAGTTGGATAA

Protein sequence : 
MDTLLANNLTLGYGDSVVIDSLNISIPKGKVTVLIGGNGCGKSTLLRSMARLLKPKSGEVVLDSEDISKMRTKEVAKKMA
ILPQSPTTPEGLSVYQLVKQGRYPYQGFAKRWSEDDEYAVNKALEDTNLMELKERTVDSLSGGQRQRAWIAMTLAQNTDT
LLLDEPTTYLDMTHQIDILDLLFDLNQDNGRTVVMVLHDINLACRYADHIIAVKDQTVYAQGKPEEVITCDLMQHVFEMN
CDVRQDPLFGTPMCIPHGKGRCLIKQAQAEAQTSQTSVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-59 48
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-59 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 8e-57 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-57 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-57 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-57 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-52 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-59 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-50 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HBHAL_4061 YP_006181676.1 iron-III-dicitrate ABC transporter ATP-binding protein BAC0164 Protein 1e-52 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HBHAL_4061 YP_006181676.1 iron-III-dicitrate ABC transporter ATP-binding protein VFG0925 Protein 2e-66 50
HBHAL_4061 YP_006181676.1 iron-III-dicitrate ABC transporter ATP-binding protein VFG1042 Protein 1e-52 47