Gene Information

Name : smpB (HBHAL_3988)
Accession : YP_006181604.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2937250 - 2937714 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
ATGCCACGAGGAAATGGTAAGACAATTGCACAAAATAAGAAGGCAGGTCATGATTTTACAATTGAAGAAACTTTCGAGGC
CGGGATCGTTCTGCAAGGAACGGAAATCAAGTCTATACGTAATGGACGTGTTAATCTAAAAGACAGCTTTGCCCGTATTA
ACAATGGTGAAGTATTCTTGCATAATCTGCATATATCACCTTACGAGCAGGGAAATATCTACAATCACGATCCAACACGT
ATGAGAAAGTTACTCCTGCATCGAAAGCAGATTAATCAATTAATTGGTCAAACCCAGCAGAAAGGGTATTCGCTCGTTCC
TTTGAAAATGTATATAAAAAATGGAGTAGCGAAAGTATTGATTGGGTTAGGTAGAGGTAAGAAAAAATATGACAAACGTG
AGGATCTGAAGCGTAAGCAGCAAAAACGTGAAATTGATCGTGCGATTAAGGATAGTCTGAAATAG

Protein sequence :
MPRGNGKTIAQNKKAGHDFTIEETFEAGIVLQGTEIKSIRNGRVNLKDSFARINNGEVFLHNLHISPYEQGNIYNHDPTR
MRKLLLHRKQINQLIGQTQQKGYSLVPLKMYIKNGVAKVLIGLGRGKKKYDKREDLKRKQQKREIDRAIKDSLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-42 62
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-35 49
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-28 43