Gene Information

Name : HBHAL_1247 (HBHAL_1247)
Accession : YP_006178901.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 260410 - 261228 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAGCTGATGACTGAAAAAGTCGGTATCGCTTATGGTGACTATAATGTAGTGGAAGACCTGGACTTGGATATTCC
CGAAAATCAAATAACGACCATTATAGGTCCTAATGGGTGTGGGAAGTCCACCATACTGAAAGCTTTAGCCAGGATCCACA
CTGTAAATTCAGGAAGCGTTTATTTAGATGGAAAAGCAATTAAAAAGGAATCCACTAAGAATATTGCTAAAAAAATGGGC
GTTCTTCCTCAAACTCCGAAAGCACCAAGCGGATTGACTGTTTCTGAATTAGTTTCTTACGGCAGGTTCCCTCATCAAAA
AGCCTTTGGCAAATTAAATGAACATGATAGAGAAATGATTCAATGGGCTCTTTCCATTACTGGCATCGAGGAATTTGCAG
ATCGGCCAATTGATGCTCTATCAGGTGGCCAGCGTCAGCGTGTATGGATTGCAATGGCACTGGCTCAGGAGACAGAACTG
CTCATTTTGGATGAGCCTACGACTTACTTAGACTTAGCTCACCAACTGGAAGTTCTTAAGCTATTAGAACAATTGAATCG
CGAAGAGGGGCGTACGATTGTAATGGTCATCCATGATTTAAACCACGCTGCGCGCTTCGCCGATTATATTGTAGCTTTAA
AGGAAGGGCGAATCATTAAGGAAGGAACACCAGAAGAAGTAATTCAGCCAAAAGTGCTGGAAGATGTCTTCCAAATTGAT
GCTGAAGTCGTCAAAGATCCAAGAACCAACCGGCCGGTCTGCCTTACCTATGACCTGCTGGGATCTGTTCCTAATGTTTG
CCAACAAGCCATTTTATAA

Protein sequence : 
MAKLMTEKVGIAYGDYNVVEDLDLDIPENQITTIIGPNGCGKSTILKALARIHTVNSGSVYLDGKAIKKESTKNIAKKMG
VLPQTPKAPSGLTVSELVSYGRFPHQKAFGKLNEHDREMIQWALSITGIEEFADRPIDALSGGQRQRVWIAMALAQETEL
LILDEPTTYLDLAHQLEVLKLLEQLNREEGRTIVMVIHDLNHAARFADYIVALKEGRIIKEGTPEEVIQPKVLEDVFQID
AEVVKDPRTNRPVCLTYDLLGSVPNVCQQAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-58 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-55 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-57 45
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-57 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-51 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-51 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-51 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-51 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-55 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-54 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HBHAL_1247 YP_006178901.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 7e-56 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HBHAL_1247 YP_006178901.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 2e-60 46
HBHAL_1247 YP_006178901.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 6e-56 44