Gene Information

Name : xerD (HBHAL_3358)
Accession : YP_006180977.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2333435 - 2334322 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGGATTACGCGTTAGAAGATTTTTTTCATTATTTAACAGTTGAGCGAGGTCTATCATCGAATACTATTCAATCTTATAA
GCGTGATCTAATGCAATACCAGCAGTTTTTACAACAGGAGTTAAATCTATCAGACTGGGATCAAGTAACAAGATCGCATA
TAATGAGGTACCTGCATGATTTGAATGATAAAGGGCGTTCTTCTGCTACAGTGGCTAGACTGCTGTCTTCCATTCGTCTC
TATCATCAATTCTTAATCAGGGAAAAAGTGACAAATGAAGATCCAAGTCTCCATATTGAAACCCCAAAAAAAGAACGAAA
GCTGCCAAAAGTACTTTCATCTGAAGAGGTGGACAAACTCCTTAATGTGGAAACGAAGGATCCTTTATCATTAAGAAATA
AAGCGATGCTGGAAATGCTTTATGCCACAGGGCTTCGCGTCACAGAACTGGTCTCTTTAAAAGTAAGCGATCTCCATCTC
ACGATGGGATTTGTACGCTGTTTAGGTAAAGGGTCTAAGGAAAGAATTATTCCTCTAGGAGATTTGGCGAAGGAAGCAGT
GCAAACTTATTTGGAACAAGGTCGTGGGGCGTTGGTCAAAAATAAAAAGACAGAAGAATTATTTGTGAATCATCATGGAA
ATAAACTGTCACGCCAAGGTTTTTGGAAAATACTGAAAGCGGTTGCCCGCGATGCTGGAATTTTAAAAGAGCTCACCCCT
CATACGCTGAGGCATTCATTTGCTACACATTTATTAGAAAATGGAGCGGACTTGCGTGCTGTACAGGAAATGTTAGGTCA
TGCTGATATTTCTACCACTCAAGTTTATACACACGTTACTAAAACACGATTAAAAGATGTTTATCGCTCGTATCATCCTC
GAGCATAA

Protein sequence :
MDYALEDFFHYLTVERGLSSNTIQSYKRDLMQYQQFLQQELNLSDWDQVTRSHIMRYLHDLNDKGRSSATVARLLSSIRL
YHQFLIREKVTNEDPSLHIETPKKERKLPKVLSSEEVDKLLNVETKDPLSLRNKAMLEMLYATGLRVTELVSLKVSDLHL
TMGFVRCLGKGSKERIIPLGDLAKEAVQTYLEQGRGALVKNKKTEELFVNHHGNKLSRQGFWKILKAVARDAGILKELTP
HTLRHSFATHLLENGADLRAVQEMLGHADISTTQVYTHVTKTRLKDVYRSYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-55 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-55 43