Gene Information

Name : tkt (HBHAL_3136)
Accession : YP_006180757.1
Strain : Halobacillus halophilus DSM 2266
Genome accession: NC_017668
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 2132155 - 2134164 bp
Length : 2010 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAATAGCCTTGAACAAACTTCAATAAATACAATTCGCACACTTACTATCGATGCTGTTGAAAAAGCAAGCTCCGG
TCATCCAGGAATGCCAATGGGGGCAGCTCCTATGGCGTATACCCTTTGGACGCAGTTTATGGATCACAATCCTAAGAACT
CTGACTGGTTTAACCGCGACCGCTTTGTACTATCTGCGGGGCATGGATCTATGCTTCTATACAGTCTCTTACATTTATCA
GGATATAAAGTGACAATAGATGATCTTAAGTCTTTCCGTCAGTGGGACTCTAAAACTCCGGGGCACCCTGAATTTGGACA
TACAGACGGTGTAGAGGCAACTACGGGTCCACTTGGTCAAGGTTTGTCTATGGCTACCGGTATGGCAATGGCTGAAGCAC
ATCTAGCTGCTAAATACAATCGTGACAACTATAATGTAGTAGACCATTACACCTTTGCTATTTGTGGTGATGGAGATCTG
ATGGAAGGCGTTTCTCAAGAAACAGCTTCTTTAGCGGGACATCTTGGACTTGGAAAGTTAGTCGTACTGTATGACTCAAA
CGACATTTCCTTAGATGGAGATTTAGACCGTTCCTTCAGCGAAAGCGTTGAAAAGCGCTACGAAGCTTATGGCTGGCAAG
TTATTCGTGTTGAGGACGGAACAGATACCGAAGAAATTGCAAAGGCGATTCAAGAAGCCAAGCAAAATACAGATCAACCG
ACGATGATCGAAGTTAAAACAGTAATTGGCTATGGTTCACCTAATAAATCTGGGAAGTCTGATTCTCACGGGGCTCCACT
TGGAGAAGAAGAAGTTACTGCAGCGAAAGCTCACTATGAGTGGGAGCATGAAGAGCTATTTCACGTTCCAGAGGAAGTAT
ATCAGGATTTCAATGAAAAAGTTCAACAAAATGGAGAAGAGAAAGAACAATCCTGGAATGAACTTATGAAACAGTATAAA
GAAAGCTACCCTGAGCTGGCTGCTGAACTTGAAGCGGCTATTAAAGGAGAACTTCCTGAAGGATGGAAGCACGAACTTCC
AACATATCAAGCTGGTGAAGACAGCCCGGCAACCCGTGCTGCTTCAGGTGATGTTATTAATGCCCTTTCTGCTAAAGTTC
CATATTTCTTTGGAGGCAGCTCAGACTTGGCAGGTTCAAACAAAACAAGTGTTAAAGAAGAAGAAGACTTCTCTCGTAAT
AATTATGCCGGCCGTAATATTTGGTTTGGCGTTAGAGAATTCGCAATGGCCGCAGCTTTAAATGGTATGGCCTTACATGG
CGGACTTAAAGTATATGGCGGAACATTCTTTGTATTTAGTGATTACCTGAGACCAGCTCTTCGTCTATCTGCACTAATGA
ATCTTCCGGTAAACTATGTCTTTACTCACGATTCTGTCGCTGTTGGAGAAGATGGACCGACTCATGAGCCAATCGAGCAG
TTACCTTCTCTTCGTGCCATGCCAAATCTATCGGTAATCCGTCCTGCTGATGGAAATGAAACCAGTGCGGCATGGCAGTT
GGCTCTGGAATCTAATACCACTCCAAACGCATTAGTATTAACTCGCCAGGGTCTGCCAACTCTTGAAGGCACGGCAGAAA
ACGCTTATGAAGGTGTTAAACATGGTGCGTATATATTAAGTGATTCCGATAAGGAAGAGCCGGATGCTATTCTGTTAGCT
TCTGGATCTGAAGTGCAGTTGATTGCAAAAGCTCAAAATGAACTGAAGAAAAAAGGTTATGACGTTCGCGTTGTAAGTAT
TCCTTCTTTCGATCGCTTTAATGCTCAAAGCAGAGAATATCAAGAGAGCGTCCTTCCTTCCAATGTTCGTAAACGTTTAG
CTGTAGAGATGGCTGCATCATTTGGCTGGGAACGCTACGTAGGTCTCGACGGTACGGTGCTCGGCATCGACCGCTTTGGA
GCTTCAGCCCCAGGTGATACTATTATCGAAAACTTTGGTTTCACTGTAGATAATGTAGTTAAACACGCTGAGAATTTAAT
GAATTCCTAA

Protein sequence :
MANSLEQTSINTIRTLTIDAVEKASSGHPGMPMGAAPMAYTLWTQFMDHNPKNSDWFNRDRFVLSAGHGSMLLYSLLHLS
GYKVTIDDLKSFRQWDSKTPGHPEFGHTDGVEATTGPLGQGLSMATGMAMAEAHLAAKYNRDNYNVVDHYTFAICGDGDL
MEGVSQETASLAGHLGLGKLVVLYDSNDISLDGDLDRSFSESVEKRYEAYGWQVIRVEDGTDTEEIAKAIQEAKQNTDQP
TMIEVKTVIGYGSPNKSGKSDSHGAPLGEEEVTAAKAHYEWEHEELFHVPEEVYQDFNEKVQQNGEEKEQSWNELMKQYK
ESYPELAAELEAAIKGELPEGWKHELPTYQAGEDSPATRAASGDVINALSAKVPYFFGGSSDLAGSNKTSVKEEEDFSRN
NYAGRNIWFGVREFAMAAALNGMALHGGLKVYGGTFFVFSDYLRPALRLSALMNLPVNYVFTHDSVAVGEDGPTHEPIEQ
LPSLRAMPNLSVIRPADGNETSAAWQLALESNTTPNALVLTRQGLPTLEGTAENAYEGVKHGAYILSDSDKEEPDAILLA
SGSEVQLIAKAQNELKKKGYDVRVVSIPSFDRFNAQSREYQESVLPSNVRKRLAVEMAASFGWERYVGLDGTVLGIDRFG
ASAPGDTIIENFGFTVDNVVKHAENLMNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 5e-156 49
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-158 48