Gene Information

Name : WFL_04640 (WFL_04640)
Accession : YP_006172378.1
Strain : Escherichia coli W
Genome accession: NC_017664
Putative virulence/resistance : Unknown
Product : Late control gene D protein (GpD)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 992171 - 993271 bp
Length : 1101 bp
Strand : +
Note : COG3500 Phage protein D

DNA sequence :
GTGAATTTCAGCTCTGAAGTGCTTAACAAAGGCAACAAAACTCCCGCATTCAGCATCAGTATTGAGGGCAGGGATATCAC
CACTGTGCTGGATAACCGCCTGATGAGTTTGACGCTGACGGACAATCGGGGCTTTGAAGCGGACCAGCTTGATCTGGAGC
TGGACGACGCCGACGGAAAAATCGTGCTGCCGCGCCGTGGTGCGGTCATTACGCTGGCGCTGGGCTGGAAGGGGCTGCCG
CTTTTCCCGAAAGGGGCATTCACGGTGGACGAGATTGAACACACTGGCGCACCGGACCGCCTGACTATCCGGGCGCGAAG
TGCTGATTTTCGTGAAACGCTGAATACCCGCCGTGAAAAATCGTGGCATAACACCACCATCGGGGAAGTGGTGAAGGAAA
TAGCCGCGCGGCACAAGCTGAAGATGGCACTGGGTAAAGACCTGTCGGATAAGCCCGTGGAGCATATAGACCAGACTAAT
GAGAGTGACGGCAGTTTTCTGATGCGGCTGGCGCGACAGTACGGTGCTATTGCGTCGGTGAAAAATGGCAATCTGTTATT
CATCCGGCAGGGACAGGGTAAAAGCGCCAGCGGTAAACCACTACCGGTGATCACTATCACACGTAAGGACGGCGACAGTC
ACCGCTTTACCCTGGCGGATCGCGGAGCTTACACGGGTGTAATTGCCAGCTGGTTGCATACCCGCGAACCCGCGAAGAAA
GAAAGCACCACGGTGAAGCGTAAGCGCAGGACTAAGAAGCAGAAGAAAGAGCCGGAAGCGAAGCAGGGCGATTACCTGGT
GGGGACGGATGAAAACGTGCTGGTACTTAATCGCACCTATGCTAATCGGAGTAACGCCGAACGGGCAGCGAAAATGCAGT
GGGAACGCCTGCAACGCGGTGTTGCGTCATTCTCGCTACAACTGGCGGAAGGTCGGGCGGATCTCTACACGGAAATGCCT
GTGAAGGTCAGCGGCTTTAAACAGCCGATAGATGATGCGGAATGGACCATTACCACCCTGACACATACCGTCAACCCGGA
TAACGGTTTTACGACCAGTCTGGAGCTTGAAGTGAGGATTGATGATTTCGAAATGGAATGA

Protein sequence :
MNFSSEVLNKGNKTPAFSISIEGRDITTVLDNRLMSLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVITLALGWKGLP
LFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHNTTIGEVVKEIAARHKLKMALGKDLSDKPVEHIDQTN
ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK
ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP
VKVSGFKQPIDDAEWTITTLTHTVNPDNGFTTSLELEVRIDDFEME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4601 NP_458684.1 putative regulator of late gene expression Not tested SPI-7 Protein 2e-138 87
t4295 NP_807892.1 regulator of late gene expression Not tested SPI-7 Protein 2e-138 87
unnamed ABR13490.1 phage late control D Not tested PAGI-6 Protein 2e-53 42