Gene Information

Name : gspI (WFL_15780)
Accession : YP_006174590.1
Strain : Escherichia coli W
Genome accession: NC_017664
Putative virulence/resistance : Virulence
Product : putative type II secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3311611 - 3311982 bp
Length : 372 bp
Strand : -
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence :
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATTCTTGAGGAAAAAACGGTAGCGGGCTGGGTGGCTGAAAACCAGACCGCGC
TGCTCTACCTGATGACCCGCGAGCAGCGGGCGGTCAGGCAGCAGGGCGAGAGCGATATGGCAGGAAGCCGCTGGTACTGG
CGAACCACACCGCTGAGTACAGGCAACGCGCTGCTCCAGGCGGTGGATATTGAAGTCAGCCTTCACGAAGACTTTTCGTC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRQQGESDMAGSRWYW
RTTPLSTGNALLQAVDIEVSLHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-41 98
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 5e-41 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_006174590.1 putative type II secretion protein VFG2052 Protein 8e-42 94