Gene Information

Name : gspL (WFL_15765)
Accession : YP_006174587.1
Strain : Escherichia coli W
Genome accession: NC_017664
Putative virulence/resistance : Virulence
Product : GspL-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3308860 - 3310038 bp
Length : 1179 bp
Strand : -
Note : COG3297 Type II secretory pathway, component PulL

DNA sequence :
GTGAGTTCCATCCTTGAGATTTTTTTCCCGCTTTGCGCCGCTGATCCCATCCATTGGCAGCGCCGTACACCCGATGTGGA
GCACGGTATCTGGTCTGACGTTGCTAACGAACAGCTCCAGCAATGGCTGCAAACCGATGCGATTCGACTCTACATTCCCG
GCGAATGGATCAGCGTCTGGCAGGTTGAACTGCCTGTTGTCGCCCGCAAGCAGATACCGACTATTCTGCCCGCCTTGCTG
GAAGAAGAGCTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAAAATCGACCAGCAACTGGCAACCGTAGCAGT
GATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCGGACT
GGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGC
GCCGGGCTGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTAGTCGG
CATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCGTTACCA
CTTATGGCAAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGG
CGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGA
ACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTAC
GCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATA
GCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTTCA
CCTCCAGTTGCGGGCAGCAAACTTTGCCAGTTTCGACAAACTGCGTAGTGCACTGGCAACCGATTATGTTGTGCAACAGG
ACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA

Protein sequence :
MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQTDAIRLYIPGEWISVWQVELPVVARKQIPTILPALL
EEELNQDIDELHFAPLKIDQQLATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWS
AGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGKPEGNLLTGPWQPRVSYRKQWARW
RVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAI
ASTLKSASLSDIEMRGFTFDQKRQTLHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 2e-118 96
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 2e-164 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspL YP_006174587.1 GspL-like protein VFG2055 Protein 5e-118 97