Gene Information

Name : ygeH (WFL_15120)
Accession : YP_006174460.1
Strain : Escherichia coli W
Genome accession: NC_017664
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3178775 - 3180151 bp
Length : 1377 bp
Strand : +
Note : COG3710 DNA-binding winged-HTH domains

DNA sequence :
ATGGACTTAGAAAATAAATTCTCATATCATTTTCTTGAGGGATTAACGCTCACGGAAGATGGAATTCTTACTCAAGGAAA
TGAGCAAGTTTATATTCCACAGAAAGAGTTAGGTGTATTAATAGTATTACTTGAATCCGCTGGTCATGTTGTACTGAAAG
ATATGATCATCGAATCAGTATGGAAAAATATTATTGTTAGTGACGAGTCCCTGACAAGATGTATCTATTCTTTGCGCTGC
ATTTTTGAAAAAATTGGCTATGATCGTTGCATAGAAACAATCTACCGGAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAA
AACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATC
CATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCG
ACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAAT
AAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATC
TCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCT
GTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTA
CGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAA
AAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCATGGAAAAAGTGAACTTGAACTTGCTGCT
CAAAAAGCATTAGAGCTTTTAGATTATGTATCAGACATAACCACTGTCGATGGAAAAATTTTAGCTATTATGGGACTGAT
AACTGGTCTGTCTGGACAAGCAAAAGTATCTCATATCTTATTTGAACAGGCTAAGATACACTCAACTGATATAGCCTCTC
TCTACTACTATAGGGCACTTGTCAACTTTCATAATGAAAAAATTGAAGAGGCAAGGATTTGTATAGACAAATCACTACAA
CTCGAACCCAGAAGACGAAAAGCAGTTGTGATAAAAGAATGTGTAGATATGTATGTGCCTAACCCGCTCAAAAACAACAT
GAAACTCTACTATAAAGAAACTGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGA
GAATTTGTATGCGATAA

Protein sequence :
MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC
IFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAA
TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS
VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAA
QKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVNFHNEKIEEARICIDKSLQ
LEPRRRKAVVIKECVDMYVPNPLKNNMKLYYKETESESHRVIIDNILKLKQLTRICMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3709 NP_311736.1 transcriptional regulator Not tested LIM Protein 0.0 98