Gene Information

Name : fepD (P12B_c0575)
Accession : YP_006167623.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : Fe3+-siderophore ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 619308 - 620324 bp
Length : 1017 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTTCGTATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGC
GACGGCATTAAGCCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGA
GCGCCGACTGCACCATCGTGCTCGACGCGCGGCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTT
GCCGGGGCGTTAATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTT
TGCCATTGTGCTGGGTGCGGCGCTGTTTGGTTACTCTTCCGCGCAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGG
TGGCCTCATTGATTGTTGCCTTTACCGGCAGTCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTG
GCGCTGGCGGCGGTGCTGGAAGGACTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAGTTGCGTTTCTG
GCAAGCCGGTTCGCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTGATCGCCGGAGCAACTG
CGCTATTACTGAGTCGCGCGCTGAACAGTTTGAGCCTCGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGC
ACACAGTTGATTGGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCAATAGTTGGCCCGATTGCCTTTATTGG
CCTGATGATGCCGCATATGGCGCGTTGGCTGGTGGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCC
CTGCCCTGCTGCTGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAACTGCGCGTTTCTGTGGTCAGTGCGTTT
ATTGGTGCACCGGTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA

Protein sequence : 
MEVRMSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGL
AGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGV
ALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVAR
TQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAF
IGAPVLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 8e-28 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 8e-28 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 8e-28 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 8e-28 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_006167623.1 Fe3+-siderophore ABC transporter permease VFG0926 Protein 2e-105 99