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Name : hsdM (P12B_c4429) Accession : YP_006171408.1 Strain : Escherichia coli P12b Genome accession: NC_017663 Putative virulence/resistance : Unknown Product : Type I restriction-modification system methyltransferase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 4878489 - 4880108 bp Length : 1620 bp Strand : - Note : - DNA sequence : ATGGCCAAAGCACCAACTAAAAAAGCCAAAGCAAAGAAAGGCTTTGAAGAAACATTATGGGATACCGCAAACCAGCTTCG CGGTAGCGTTGAGTCCTCCGAATACAAGCACGTGGTGTTGAGCCTCGTATTCCTGAAATTCATCAGCGATAAGTTTGAAG CACGCCGCAAAAAAATGATTGCCGATGGGCAAGCAGACTTCCTTGAGATGGAAGTGTTCTACCAGCAGGACAACATTTTC TACCTGCCGGAAGAGGCGCGCTGGTCGTTTATCAAACAAAATGCCAAACAGGACGATATTGCGGTCCGAATTGACACCGC CCTCTCGACCATTGAGAAACGTAACCCAACCCTGAAAGGCGCTCTGCCAGACAACTACTTCAGCCGTCAGAATCTGGAAA CCAAAAAACTGGCGTCACTGATTGATACCATCGACAACATCGAAACGCTGGCACACGAAACTGACGTTGAAACGTTATCG AAAGAAGACCTGGTCGGACGCGTTTACGAATACTTCCTCGGTAAGTTTGCCGCAACTGAAGGCAAAGGCGGGGGTGAGTT CTACACGCCCAAATGTGTGGTTACGCTGTTAACTGAAATGCTCGAACCCTTTCAGGGCAAAATTTATGACCCGTGCTGCG GCTCGGCAGGGATGTTCGTGCAGTCGGTGAAGTTTGTCGAAAGCCATCAGGGTAAAAGCCGTGATATCGCGCTGTATGGT CAGGAACTGACAGCCACGACGTATAAACTGGCAAAAATGAACCTCGCCATTCGCGGTCTTTCAGCTAACCTCGGCGAACG ACCGGCAGACACCTTCTTTAGCGACCAGCACCCGGACCTGAAAGCCGACTACATTCTGGCGAACCCGCCCTTCAACCTGA AAGACTGGCGTAATGAAGCCGAATTAACCAAAGACCCACGTTTTGCTGGGTATCGTATGCCGCCAACCGGTAACGCCAAC TACGGCTGGATTTTGCATATGCTCTCCAAGCTGTCGGCTAACGGCACAGCAGGTTTTGTGCTGGCAAACGGTTCGATGAG TTCTAACACCAGCGGTGAAGGCGAGATCCGTGCACAGATGATCGAAAATGATCTGATTGACTGCATGATCGCCCTACCTG GACAGTTGTTCTACACCACGCAGATCCCGGTGTGTTTATGGTTTATGACCAAATCGAAGGCTGCCGACCCGGCCAAAGGT TATCGTGATCGTCAGGGCGAGACGCTGTTTATTGATGCGCGTAACCTCGGCACCATGATTAGCCGCACAACTAAAGAGTT AACGACGGAAGATATTGCCACAATCGCCGATACCTACCATGCCTGGCGCAGTACGCCAGAAGAACTGGCTGCACGGATTG CGCGTGGTGACAGCAAGTTGGAAAAATATGAAGACCAGGCAGGCTTCTGCAAAGTTGCGACCCTGCAAGATATTAAAGAT AACGACTACGTTCTGACACCGGGCCGCTATGTGGGTGCAGCCGAACAGGAAGAAGACGGCGTGGCATTTGAGACCAAAAT GCGTGAATTGTCGAAGACGTTGTTTGAGCAGATGAAGCAGGCGGAAGAACTGGATCGTGCGATTCGCCAGAATCTGGAGG CGCTGGGTTATGGGGAGTAA Protein sequence : MAKAPTKKAKAKKGFEETLWDTANQLRGSVESSEYKHVVLSLVFLKFISDKFEARRKKMIADGQADFLEMEVFYQQDNIF YLPEEARWSFIKQNAKQDDIAVRIDTALSTIEKRNPTLKGALPDNYFSRQNLETKKLASLIDTIDNIETLAHETDVETLS KEDLVGRVYEYFLGKFAATEGKGGGEFYTPKCVVTLLTEMLEPFQGKIYDPCCGSAGMFVQSVKFVESHQGKSRDIALYG QELTATTYKLAKMNLAIRGLSANLGERPADTFFSDQHPDLKADYILANPPFNLKDWRNEAELTKDPRFAGYRMPPTGNAN YGWILHMLSKLSANGTAGFVLANGSMSSNTSGEGEIRAQMIENDLIDCMIALPGQLFYTTQIPVCLWFMTKSKAADPAKG YRDRQGETLFIDARNLGTMISRTTKELTTEDIATIADTYHAWRSTPEELAARIARGDSKLEKYEDQAGFCKVATLQDIKD NDYVLTPGRYVGAAEQEEDGVAFETKMRELSKTLFEQMKQAEELDRAIRQNLEALGYGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 5e-139 | 54 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 9e-139 | 54 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-137 | 53 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 1e-117 | 45 |
