Gene Information

Name : P12B_c0391 (P12B_c0391)
Accession : YP_006167444.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : IS2 transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 412203 - 412859 bp
Length : 657 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAAACCGCTGTACC
GCCATCGAAACGGGCACATACTGGCAAAGTGGCCGTGAAAGAAAGCAATCAACGATGGTGCTCTGACGGGTTCGAGTTCC
GCTGTGATAACGGAGAAAAACTGCGAGTCACGTTCGCGCTGGACTGCTGTGACCGTGAGGCACTGCACTGGGCAGTCACT
ACGGGCGGCTTCGACAGTGAAACAGTACAGGACGTAATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGAGCTTCCGGC
GTCTCCAGTAGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGGCAGTTTGCCCGGATGTTGGGGC
TTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGCATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGAC
TACATCAGTATCATGCCTAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATG
GCATCCGCATAGTGCACTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCAGGCCAGTAATGGGTTAAGTGATAACA
GGTGTCTGGAAATATAG

Protein sequence :
MPAINAKRVYRIMRQNALLLERKTAVPPSKRAHTGKVAVKESNQRWCSDGFEFRCDNGEKLRVTFALDCCDREALHWAVT
TGGFDSETVQDVMLGAVERRFGNELPASPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRD
YISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQQASNGLSDNRCLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 3e-98 99
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 5e-98 99
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 1e-98 98
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-96 96
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 2e-96 96
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 4e-96 96
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 4e-96 96
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-96 96
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 4e-96 96
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 3e-95 95
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 4e-95 95
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 2e-90 87
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 1e-64 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c0391 YP_006167444.1 IS2 transposase orfB VFG1732 Protein 2e-98 99
P12B_c0391 YP_006167444.1 IS2 transposase orfB VFG0649 Protein 1e-96 96
P12B_c0391 YP_006167444.1 IS2 transposase orfB VFG0621 Protein 1e-96 96
P12B_c0391 YP_006167444.1 IS2 transposase orfB VFG0608 Protein 1e-96 96