Gene Information

Name : P12B_c3776 (P12B_c3776)
Accession : YP_006170763.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : transposase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4123436 - 4124326 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGCGAACTGCATGTTGCCCCGTCAAC
GTATTACCACTGTCAGCAACAGCGACATCATCCGGAGAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAG
AGATACAGCGCGTATACGATGAAAATCACCAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATC
AGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTAC
GACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCTGACCAGCTGTGGG
TGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATC
GTGGGATGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC
GTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGAT
TACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATAGTCTTTACAAAGCGGAG
GTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCG
ACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCTATCGGAAACAATGATC
TGGCAGCCTGA

Protein sequence :
MMPLLDKLREQYGVGPVCSELHVAPSTYYHCQQQRHHPEKRSARAQRDDWLKKEIQRVYDENHQVYGVRKVWRQLLREGI
RVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYI
VGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINSLYKAE
VIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNNDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-108 99
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 3e-135 98
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-135 98
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 8e-93 98
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 9e-135 98
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-93 98
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-101 98
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 8e-135 97
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 7e-131 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-131 97
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-131 97
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-131 97
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 8e-135 97
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 9e-134 96
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-129 96
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 1e-133 96
Z1198 NP_286733.1 transposase Not tested TAI Protein 1e-130 95
Z1638 NP_287141.1 transposase Not tested TAI Protein 1e-130 95
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 4e-131 95
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-131 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 6e-130 94
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-52 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c3776 YP_006170763.1 transposase-like protein VFG1602 Protein 4e-130 94