Gene Information

Name : insF (P12B_c3425)
Accession : YP_006170417.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3722915 - 3723775 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence :
ATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCCAGCGGCTG
GTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGG
CTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTA
AAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGC
ACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACA
TCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGG
TCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAA
CGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTG
GAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATC
CATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATATGATTACAATCGGTGGCG
GCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG

Protein sequence :
MSLLKNIRLSSASKQCAACSGWPASGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNV
KTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGW
SMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECI
HGEHFISREIMRATVFNYIEYDYNRWRRHSWCGGLSPEQFENKNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-119 99
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 7e-120 99
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 3e-120 99
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 5e-100 86
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-40 48
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-40 48
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-40 48
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-42 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-41 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 9e-42 42
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-41 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 9e-42 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-42 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-41 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-41 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insF YP_006170417.1 transposase VFG1631 Protein 3e-100 86
insF YP_006170417.1 transposase VFG1706 Protein 6e-42 42