Gene Information

Name : kpsT (P12B_c3178)
Accession : YP_006170178.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : KpsT protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3478151 - 3478828 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAAGATTGAGAACTTAACAAAGTCGTATCGAACACCGAAGGGGCGACATTTTGTTTTTAAAGATTTGAATGTGGA
TCTTCCATCAGGAAAAAGTGTAGCTCTGATAGGGCGAAACGGCGCTGGCAAATCGACTCTTCTTCGTATGATTGGTGGAA
TTGATCGTCCTGATAGCGGTAATATTATCACTGATAGTACAATCTCTTGGCCAGTGGGTCTTGCTGGAGGGTTTCAGGGA
AGTTTGACCGGGCGAGAAAATGTCAAATTTGTTGCTCGCTTATATTCTAAAAGCGAGGAGATAAAAAACAAGGTAGCATT
CGTTGAGGAGTTTGCTGAATTGGGCAAATATTTTGATATGCCTATTAAAACATACTCATCAGGAATGCGTTCCAGGCTCG
GCTTTGGCTTAAGTATGGCTTTCAAATTTGATTATTATCTTGTCGATGAAGTGACAGCTGTTGGAGATGCCAGATTTAAA
AAGAAATGTGCAGATATTTTTAATGAAAGACATAAAGAAGCTAGTTTTCTAATGGTGTCGCATAGTTTGAACTCATTAAA
AGCATACTGTGATATCGCACTGTATGTTGGAAGGAATAATGAGACGAAATTATTCATGGATATAAACGAAGCGATAAATA
AGTACGCCATAGATGAAAACTTAAGCTTTGTTAAATGA

Protein sequence : 
MIKIENLTKSYRTPKGRHFVFKDLNVDLPSGKSVALIGRNGAGKSTLLRMIGGIDRPDSGNIITDSTISWPVGLAGGFQG
SLTGRENVKFVARLYSKSEEIKNKVAFVEEFAELGKYFDMPIKTYSSGMRSRLGFGLSMAFKFDYYLVDEVTAVGDARFK
KKCADIFNERHKEASFLMVSHSLNSLKAYCDIALYVGRNNETKLFMDINEAINKYAIDENLSFVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 7e-78 75
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 4e-79 73
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 7e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_006170178.1 KpsT protein VFG1449 Protein 2e-79 73
kpsT YP_006170178.1 KpsT protein VFG0696 Protein 4e-46 48
kpsT YP_006170178.1 KpsT protein VFG0258 Protein 3e-45 47
kpsT YP_006170178.1 KpsT protein VFG2563 Protein 4e-43 44