Gene Information

Name : P12B_c3175 (P12B_c3175)
Accession : YP_006170175.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Unknown
Product : IS1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3471934 - 3472158 bp
Length : 225 bp
Strand : -
Note : -

DNA sequence :
GTGCGTAACGGTAAAAGTACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAGCTACAGTTCAC
TTACACCGCCTCTCAGCCCGGTACACACCAGAAAATTATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCAC
GCATTATGGGCGTTGGCCTCAACACGATTTTACGACACTTAAAAAACTCAGGCCGCAGTCGGTAA

Protein sequence :
MRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTILRHLKNSGRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 5e-30 98
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 5e-30 98
insA AEZ06026.1 InsA Not tested AbaR24 Protein 8e-30 96
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 1e-29 96
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 6e-30 96
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 1e-29 96
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 1e-29 96
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 9e-30 96
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 8e-30 96
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 8e-30 96