Gene Information

Name : P12B_c3172 (P12B_c3172)
Accession : YP_006170172.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3469981 - 3470844 bp
Length : 864 bp
Strand : -
Note : ykfA

DNA sequence :
ATGAATAATTCTGAAGGTTTGAAGTCGTTTCAGCAATCGCTTGCTGATCTGCCGCAATGGGTATCAGAGCGGCTTCTGCA
GCAAATTAACCAGTTAACTAACTACGAGCCAGTGATCGGCATTATGGGTAAAACCGGTGTTGGGAAGAGCAGTCTGTGCA
ATGCCCTGTTTGCCGGAGATATATCACCGGTCAGCGATGTGGCGGCCTGTACACGTGAGTCACTGCGCTTTCGCCTGCAA
GTCGGCGACCGCTATATAACGCTGATGGATCTGCCCGGCGTGGGCGAAAGTGGCGCTCGCGATACCGAGTATGCTGCGCT
GTACCGCGAACAGCTTCCTCGCCTCGACCTGGTACTGTGGCTGATTAAGGCCGATGACCGGGCGCTGACGGTGGATGAAC
ATTTTTATCATCAGGTGATTGGAGAGGTATACCGGCATAAGGTGCTGTTTGTTATCAGCCAGTCGGATAAGGCCGAACCT
ACCAGCGGTGGGGGACAGTTGTCCACGGCGCAGAAGAAGAATATCAGCCGCAAAATCTGCCTGCTGCATGAGCTGTTCCA
GCCCGTCCATCCGGTGTGTGCTGTGTCGGTCCGTCTACAATGGGGGCTTAAGGTGATGGCCGAGCGGATGATTAAGTGCC
TGCCACGTGAGGCCACCAGCCCGGTGGTGTCGCAACTCCATCCTTCCTTTCGCACGACGGTAGTCCGGGAACAGGCTCGT
AGCGATTTTGGTGAAACCGTCGGGGCCGTACTCGATAGCATCAGTGCCTTTCCCCTGATACCCGCCCCGGTGCGGGCCGT
CATTCAGGCCGTGCGCACCACCGTGGTGTCAGTGGCCCGTGCCGTCTGGGATTTCTTCTTCTGA

Protein sequence :
MNNSEGLKSFQQSLADLPQWVSERLLQQINQLTNYEPVIGIMGKTGVGKSSLCNALFAGDISPVSDVAACTRESLRFRLQ
VGDRYITLMDLPGVGESGARDTEYAALYREQLPRLDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSDKAEP
TSGGGQLSTAQKKNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCLPREATSPVVSQLHPSFRTTVVREQAR
SDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTVVSVARAVWDFFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL99256.1 unknown Not tested LEE Protein 5e-57 50
unnamed AAL08471.1 unknown Not tested SRL Protein 4e-57 50
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 7e-57 50
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-57 50
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 8e-57 50
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 8e-57 50
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 1e-56 50
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 2e-56 49
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-55 49
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-55 49
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 3e-56 49
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 2e-57 49
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c3172 YP_006170172.1 hypothetical protein VFG1062 Protein 2e-57 50
P12B_c3172 YP_006170172.1 hypothetical protein VFG0654 Protein 1e-56 49
P12B_c3172 YP_006170172.1 hypothetical protein VFG1674 Protein 1e-57 49