Gene Information

Name : P12B_c3171 (P12B_c3171)
Accession : YP_006170171.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3469062 - 3469904 bp
Length : 843 bp
Strand : -
Note : yafZ

DNA sequence :
ATGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCAGCAAACCTTATCCGTCGCGACCGTCCGTTAACCCG
TGAAGAGCTGTTTCGCGTAGTGCCCAGTGTATTCAGTGAGGACAAACACGAGTCCCGTAGTGAGCGTTATACCTATATAC
CCACCATCTCCCTGCTCGACAGCCTACAGCGAGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACCCGCGTGCGTGACCCG
GGTCGTCGTGAACATACAAAGCATATGCTGCGCCTTCGTCGGGAGGGGCAGATTACCGGTAAGCAGGTGCCGGAAATCAT
TTTGCTGAATTCACATGATGGCACCAGTTCGTACCAGATGTTGCCGGGACTATTTCGCGCAGTTTGTCAGAACGGGCTCG
TCTGTGGTGAGTCGTTTGGCGAGGTGCGGGTGCCGCACAAGGGGGACGTGGTGAGTCAGGTAATTGAAGGCGCGTATGAG
GTACTGGGCATTTTTGACCGTGTGGAGGAGAAGCGGGATGCGATGCAGTCGTTGCTGTTGCAGCCTCCTGCGCAACAGGC
ACTGGCACAGGCTGCACTGACGTACCGGTTCGGGGAGGACCACCAGCCGGTTGCGCCGTCACAGGTGCTCTCCCCGCGCC
GCTGGCAGGATGAGAGTAACGACCTGTGGACCACGTACCAGCGTATTCAGGAGAACCTGATTAAGGGCGGGCTCAGTGGT
CGTAGCGCAAAAGGCGGGCGCACGCATACCCGTGCCGTGCGGGGCATAGACGGTGATGTGAAGCTTAACCGGGCACTGTG
GGTGATGGCGGAAGCGATGCTCAGTGGTTTTCGGCCTGCGTGA

Protein sequence :
MRSLLMTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDP
GRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYE
VLGIFDRVEEKRDAMQSLLLQPPAQQALAQAALTYRFGEDHQPVAPSQVLSPRRWQDESNDLWTTYQRIQENLIKGGLSG
RSAKGGRTHTRAVRGIDGDVKLNRALWVMAEAMLSGFRPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-93 75
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-93 75
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-93 75
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-93 75
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-93 75
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-93 75
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 8e-93 74
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 7e-93 74
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-94 74
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-94 74
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-94 74
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-92 74
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 8e-93 74
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-93 73
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 9e-95 73
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-73 58
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 1e-74 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c3171 YP_006170171.1 hypothetical protein VFG0658 Protein 3e-93 74
P12B_c3171 YP_006170171.1 hypothetical protein VFG1526 Protein 1e-94 74
P12B_c3171 YP_006170171.1 hypothetical protein VFG1676 Protein 3e-92 74
P12B_c3171 YP_006170171.1 hypothetical protein VFG1615 Protein 2e-93 73