Gene Information

Name : P12B_c3168 (P12B_c3168)
Accession : YP_006170168.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3463734 - 3464198 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
ATGCCCATGACAACACAGACGCAGTACGACCTCGCACCCGCTAACCAACCCGAATTTGAACTGACCGTCACGCCGGTCCC
CGATGAACAGCGTATCGATTTCTGGCCACAGTACTTTGGCGCTATCCCGCAGTGGCTACTCCTGGAGCCGCATATCTTCG
CCTGGATGGACCGCTTCTGTGAGGGCTACAGCGGTGGTATCTGGTCGTTCTACACCCTCAGCAATGGCGGCGCATTTATG
TCCCCCGAGCCTGACAACGATGAGACATGGCGTCTGTTTAACTGCCTGAACGGTAACGATGCCCAAATGAGTGCAGAAGC
AGCAGGTATTGCTGTCTGCCTGATTGCGTATAGCCACCATGCCTGCCGTACAGAATGTGACGCGATGACCGCACACTATT
ACCGCCTGCGGGACTACACCCTGCAACACCCCGAGTCACAGGCCATTCTGCGCATTATTGATTAA

Protein sequence :
MPMTTQTQYDLAPANQPEFELTVTPVPDEQRIDFWPQYFGAIPQWLLLEPHIFAWMDRFCEGYSGGIWSFYTLSNGGAFM
SPEPDNDETWRLFNCLNGNDAQMSAEAAGIAVCLIAYSHHACRTECDAMTAHYYRLRDYTLQHPESQAILRIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 2e-44 73
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 2e-44 73
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-43 72
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-43 72
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 2e-42 71
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 2e-48 69
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 1e-45 69
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 5e-46 69
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 9e-44 69
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 5e-47 69
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-47 69
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 3e-43 67
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 3e-43 67
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 4e-48 67
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-43 66
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-43 66
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-43 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
P12B_c3168 YP_006170168.1 hypothetical protein VFG1677 Protein 6e-49 69
P12B_c3168 YP_006170168.1 hypothetical protein VFG1616 Protein 2e-47 69
P12B_c3168 YP_006170168.1 hypothetical protein VFG0659 Protein 9e-44 67
P12B_c3168 YP_006170168.1 hypothetical protein VFG1527 Protein 2e-48 67