Gene Information

Name : gspC (P12B_c3066)
Accession : YP_006170069.1
Strain : Escherichia coli P12b
Genome accession: NC_017663
Putative virulence/resistance : Virulence
Product : General secretion pathway protein C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3352923 - 3353753 bp
Length : 831 bp
Strand : -
Note : -

DNA sequence :
ATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAATGGCGCATTCACTCTGGCGCTATATCTCCTTTTCTGCGGAATA
TACGGCGGTTTCTCAACCGGTGAATAAACCGAGCCGTGTGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCA
GCCAGCAAAACTGGTTTGGCAAATATCAGCCTGTCGCCGCGCAGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACG
CGTCTTAATGTGGTGCTGCGTGGGATCGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGT
CTATTTGCAGGGTGAAACGCTTGGCTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGTTATC
AGGGAAAAATAGAGCGTCTGAGTCTGGCAGAAGAGGAACGTTCCACTGTTGCTGTGACCAACAAAAAAGCCGTCAGTGAC
GAAGCAAAGCAAGCTGTTGCTGAGCCTGCTGTCAGTGTGCCAGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAA
AGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGCGAAGCCGG
GGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACT
GATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGC
GCGCCACGACATTTCCATCGCGCTGCGCTAA

Protein sequence :
MFWLMLLIISAKMAHSLWRYISFSAEYTAVSQPVNKPSRVDAKTFDKNDVQLISQQNWFGKYQPVAAQVKQPEPVPVAET
RLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSD
EAKQAVAEPAVSVPVEIPAAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFT
DPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspC CAE85235.1 GspC, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-113 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspC YP_006170069.1 General secretion pathway protein C VFG2046 Protein 1e-112 93